Protein

Protein accession
1HMGp [EnVhog]
Representative
1HMGp (this protein)
Source
EnVhog (cluster: phalp2_5092)
Protein name
1HMGp
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MTYHAFVDSEGDLFQTQDFKTVSWHASGHNTDSVGVCIQYRATGNDQPPPEDQLEAAIDYIAHVNVHFGIPSDQTFGHRELLGTGYNLVDGKRVLRKECPGMKVDMDKFRKDLDTKMKTLLKEKGFDDLAAYSKQAQLKSPLPF
Physico‐chemical
properties
protein length:144 AA
molecular weight:16222,1 Da
isoelectric point:5,82
hydropathy:-0,60
Cluster Membership

This protein is the only member recorded for this cluster.

Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_12432
kMJA
 24 40,4% 94 1.637E-13
2 phalp2_5712
4IjX3
 263 32,2% 118 4.184E-13
3 phalp2_9720
40UHt
 92 30,6% 111 1.896E-09
4 phalp2_28697
4ATEG
 42 25,8% 120 1.068E-07
5 phalp2_11760
45aqa
 242 27,7% 126 8.022E-06
6 phalp2_26914
4sxVx
 24 30,1% 116 2.016E-05
7 phalp2_2936
ULjI
 1 28,8% 104 1.267E-04
8 phalp2_2237
4n15b
 512 30,3% 112 1.720E-04

Domains

Domains
Ami2
Protein sequence: 1HMGp
1 144
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1HMGp
Method AlphaFoldv2
Resolution 90.88
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50