Protein

Protein accession
4HkdD [EnVhog]
Representative
4HkdD (this protein)
Source
EnVhog (cluster: phalp2_23147)
Protein name
4HkdD
Lysin probability
81%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
LTHFPQSSGLLWSVSVVAIANRLDPRLVLAVVMVESSGNPAAVNGRCVGLMQVNVPVWQRVLSLDQKRMTEPLYNLRAGCRILRHYLDIEQDDVRRALRRYHGARSWRYAERVLKVWEGRN
Physico‐chemical
properties
protein length:121 AA
molecular weight:13922,0 Da
isoelectric point:10,50
hydropathy:-0,19
Other Proteins in cluster: phalp2_23147
Total (incl. this protein): 8 Avg length: 126,3 Avg pI: 9,50
Protein ID Length (AA) pI
1lmHs 129 9,64262
2LdmC 119 8,97414
4Dz4s 128 9,11894
4GZ31 128 9,28127
4H01n 121 9,41859
4HfPi 128 9,38049
5aRmq 136 9,69451
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_36497
1lkPy
 4 39,1% 92 4.919E-20
2 phalp2_27742
70Ccg
 2 34,0% 94 9.838E-14
3 phalp2_38582
1YZSf
 6 39,2% 107 4.752E-13
4 phalp2_21025
8KK9
 3 31,1% 93 3.141E-12
5 phalp2_26826
3T8ym
 5 30,3% 112 2.841E-11
6 phalp2_40124
7YNXd
 9 30,8% 120 5.329E-11
7 phalp2_17374
4Hs8K
 1 38,0% 100 1.874E-10
8 phalp2_27552
5rxEe
 14 36,5% 115 1.234E-09
9 phalp2_9786
8askd
 4 24,7% 105 3.163E-09
10 phalp2_16618
8yg21
 13 33,6% 125 2.077E-08

Domains

Domains
SLT
Protein sequence: 4HkdD
1 121
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01464

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4HkdD
Method AlphaFoldv2
Resolution 94.04
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50