Protein

Protein accession
2Tdmt [EnVhog]
Representative
XCY6
Source
EnVhog (cluster: phalp2_11542)
Protein name
2Tdmt
Lysin probability
99%
PhaLP type
endolysin
Probability: 74% (predicted by ML model)
Protein sequence
VVIDPTAKRKKYLLVGAIREWNATHPKQHVSYAPGFDPDTEKIGTPARETLRAYSRTAWHDTTGVWNADTMRRLILVRNPRAGIRAEVMALAHSQLGVHETPDGSNWGPVAKYLEAVGIHGGAPWCASFVTWALKKCGLRAYPPNPAYVPSWEDWGRQHGLLIPVKDSKLGDLWVWNWDGGLADHIGFCDDSNPGDPVAYYLDGNIGNRVTQGSRPAAGIEVAISLAKLAALR
Physico‐chemical
properties
protein length:233 AA
molecular weight:25579,7 Da
isoelectric point:8,74
hydropathy:-0,32
Representative Protein Details
Accession
XCY6
Protein name
XCY6
Sequence length
229 AA
Molecular weight
25604,13660 Da
Isoelectric point
8,37781
Sequence
MVLLFDPAAQRKKYALVKFVRSWNEKNPGHQIVRPPGFDPETDVIGTPAREFVKSLQRETRLTVTGQFDLATMLMILPPGIRSEVMALAHTQLGMHEWPDGSNMGEIVKYLNAVGLGGGYPWCAAFVTWDLKKNGFTHFPPNPAYVPSYHDWAQAKGLLKPVSESKLGDLWIWWQNQHIGFCDDTNPKDWIAYGLDGNVGAHGGSVTQVRRTSQEVTACIDIVKMKALK
Other Proteins in cluster: phalp2_11542
Total (incl. this protein): 6 Avg length: 234,0 Avg pI: 9,38
Protein ID Length (AA) pI
XCY6 229 8,37781
2CYdC 242 9,84885
40sBB 229 10,08609
4MVrr 241 8,79815
7J5EG 230 10,43551
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_31911
4MqOK
 4 28,8% 229 1.684E-42
2 phalp2_27346
4wbgy
 15 30,1% 212 1.623E-26
3 phalp2_17977
1cKmn
 23 31,5% 165 3.836E-19
4 phalp2_26897
4iEd7
 290 26,9% 167 5.214E-19
5 phalp2_36449
15wZr
 41 27,1% 177 8.025E-16
6 phalp2_15515
8mtdC
 92 26,5% 147 1.401E-13
7 phalp2_12626
1GVDc
 12 28,0% 171 1.401E-13
8 phalp2_1997
4I9sn
 4 18,7% 229 2.123E-12
9 phalp2_31351
2tjAl
 675 26,2% 164 7.814E-11
10 phalp2_10911
4DZTv
 37 22,2% 202 2.586E-10

Domains

Domains
Unannotated
Representative sequence (used for alignment): XCY6 (229 AA)
Member sequence: 2Tdmt (233 AA)
1 229 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (XCY6) rather than this protein.
PDB ID
XCY6
Method AlphaFoldv2
Resolution 93.38
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50