Protein

Protein accession
2Sd4l [EnVhog]
Representative
6VBua
Source
EnVhog (cluster: phalp2_35284)
Protein name
2Sd4l
Lysin probability
99%
PhaLP type
endolysin
Probability: 94% (predicted by ML model)
Protein sequence
MPAMQGLLKQSYTLDQFEAYLEAEVKPKLTGWRPRMIVDHNTGKMVWPGFDVRGNKITPAQRIENMSVDWAARGFTGGPHLLISPDGMINTVWPLWLRGTHSPSWNAVSWGIEHVGDFSVEQLTPEARAASLGAKKALFKLLGIEADQGSYKFHLEDPKTTHKQCPGKNFGTKASWLGALNANAGPVAALDLPHVHALTASAWAKTDLKRLEAFRDKAYQLKGIWHVGYGFRDGFKGLHVDASTTMTLEQANALFDKSVDEMADTISSFVHVPLSQAQMDGLVLIGWNIGTGALSGSTVIKRLNTGDVAGAADAFLMWNKLRPSPGAPLEVSPGLDVRRKYERQVFLGLIPAKPAASKLLTLGSVGHGLIGESPMNSILSSVVSFALERSKAIAGAAAAAAVTAGMAAAEQQLNITIPTEWKLGIVAFVAGIFVHNTPNKAPAAKA
Physico‐chemical
properties
protein length:446 AA
molecular weight:47855,4 Da
isoelectric point:9,17
hydropathy:-0,04
Representative Protein Details
Accession
6VBua
Protein name
6VBua
Sequence length
458 AA
Molecular weight
49306,72660 Da
Isoelectric point
8,22502
Sequence
MPEMQGLVLQEFTPDAFDAYCKNIIVPALKTSGWTPLGAVLHNTGRIPDWEKISAAQHVRNMSVDWVARNFTGGPHFLVTPTGSIMAVWPAWKRGTHSPSYNHDYWGVEMVGDFTLDPFPDVMRVAATRLLSALYSIGLNKTADETNFHLHKEDPRTTHKLCPGIKCGDKAAWLSRINYGTSAPAPVPVPVHVALMPVPEGTRELIQGFEAFRSSAYLDGVHPDGTPRYAVGWGTNIKPDGTAVVATDTCTREQADAWLDTHIAATSAAIQKVVTGRLTPGVLKSFISFTYEEGIGSFARSAMLAAYNAGDYQEAARQFMTWDKHRDANKALVVSTGIHDRRAKELALWDVAISGPLPPPAPTVKPAPATTPVNPPKETHMDMTNTTPWYKSQTIWGGLQAVVGGSIAVYMALKAGDVGSAVTAGQTVFVAAAGLASAFGGLQAVIGRFKATKMITAK
Other Proteins in cluster: phalp2_35284
Total (incl. this protein): 3 Avg length: 429,0 Avg pI: 8,05
Protein ID Length (AA) pI
6VBua 458 8,22502
2Kp7u 383 6,75619
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_11783
86KhL
 1 36,1% 376 3.840E-117
2 phalp2_8287
e9De
 2 27,0% 336 2.133E-22
3 phalp2_37863
4N9Dj
 1 18,1% 453 1.780E-09

Domains

Domains
Ami2
GH24
Unannotated
Representative sequence (used for alignment): 6VBua (458 AA)
Member sequence: 2Sd4l (446 AA)
1 458 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00959, PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
2Sd4l
Method AlphaFoldv2
Resolution 79.65
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (6VBua) rather than this protein.
PDB ID
6VBua
Method AlphaFoldv2
Resolution 80.09
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50