Protein

Protein accession
1GkNP [EnVhog]
Representative
1GkNP (this protein)
Source
EnVhog (cluster: phalp2_38843)
Protein name
1GkNP
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MGIYGLAQAPVFQEPGDIYETSPFGEMRGTYIHKGVDIVRRYSGGNKTATIVAIADGKVVAVKNTVTGVDHNRNLEGNYVAVDHGGGLVTKYFHLKYGSVPASICRGATVKKGAVLGYMGNTGDSYGAHLHFQIEQNGKPIDGAPYLKGQKVIGGATAEEYIKKIVQKVGYDDPASAIAAFKMAKHRFPADLWRKLWEAVK
Physico‐chemical
properties
protein length:201 AA
molecular weight:21687,5 Da
isoelectric point:9,33
hydropathy:-0,24
Other Proteins in cluster: phalp2_38843
Total (incl. this protein): 11 Avg length: 215,3 Avg pI: 6,72
Protein ID Length (AA) pI
14Y5p 212 8,71343
1GgMv 232 5,85552
3Q5oC 228 5,13861
3a2vr 227 5,24507
3iuvt 201 5,68676
3ml5J 200 8,82290
45r8n 225 4,96769
4kiIs 200 8,28872
5N6Lz 237 5,75042
7E0ca 205 6,14295
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_25537
3nGXJ
 39 38,5% 135 2.635E-30
2 phalp2_15540
8qQUm
 26 42,4% 158 8.205E-29
3 phalp2_665
1mzrw
 14 35,2% 139 2.095E-28
4 phalp2_5933
67ENK
 29 37,3% 142 5.346E-28
5 phalp2_4014
134xF
 12 30,8% 172 4.755E-27
6 phalp2_8068
5XJOH
 17 38,7% 165 2.263E-26
7 phalp2_35838
4GGll
 4 33,5% 140 3.314E-24
8 phalp2_14848
7w0BH
 74 35,8% 145 1.524E-18
9 phalp2_33390
6Q97d
 9 31,9% 147 7.303E-16
10 phalp2_35648
1pm6e
 9 35,7% 123 9.935E-16

Domains

Domains
PET_M23
Unannotated
Protein sequence: 1GkNP
1 201
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01551

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1GkNP
Method AlphaFoldv2
Resolution 85.07
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50