Protein

Protein accession
2RdIM [EnVhog]
Representative
8CpUp
Source
EnVhog (cluster: phalp2_17816)
Protein name
2RdIM
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
SVYDKAVAHGKQRIKEGQSPFFEDKPQSIVLESDDVPIGNVGKEVEINNNDFQSKLLPSVFKAEGGYSDDPTDTGNFIGGDTSSALVGTNHGISADVLSEYLKRPATAEDMKSLTKDKAKEIYEKVFYTDMGIDKLPKDVQEIVFHGVVNSKGHAIKVVQKLLGLKEDGVVGPKTIEAMKNADFTKEEFKDALLNKYKTFKTWDKHGEGWTNRFEELAK
Physico‐chemical
properties
protein length:219 AA
molecular weight:24289,0 Da
isoelectric point:5,48
hydropathy:-0,62
Representative Protein Details
Accession
8CpUp
Protein name
8CpUp
Sequence length
195 AA
Molecular weight
21683,46220 Da
Isoelectric point
9,79760
Sequence
mtkrnkenkrmanngeiisnlldsvikteggyqaapedtgnynsegklvgtnfgisakvlsthlnrpasmddmkgltrqaakniyrknyikpvtenlgikpsdpafyqtldmvvnhgysntvpiiqralgitvdgksgpatkkaieetkkdskkfnntlvkkrvefykdiaknnptegskflkgwlnrantflqp
Other Proteins in cluster: phalp2_17816
Total (incl. this protein): 42 Avg length: 224,5 Avg pI: 6,81
Protein ID Length (AA) pI
8CpUp 195 9,79760
1Kpd6 213 9,61851
1PqiB 245 5,38171
1wOXN 213 5,46782
1yGpb 232 5,93720
23iZ1 201 8,78725
26Miw 256 4,94791
2AsRR 227 4,77427
2H3gk 230 6,34132
2ITAh 225 9,33072
2ckV6 177 8,68810
2wHll 288 9,71173
2wUc2 314 9,79476
3L0II 186 6,76511
3RHY9 194 9,31789
3VfRC 256 5,05676
3YZsQ 256 4,95388
3YiEU 270 5,04460
42RvW 178 5,81153
4r2Sw 179 9,09728
5H0RN 178 5,43332
6BaQ3 171 5,84898
6JAqT 172 8,66586
8Cpjt 196 6,05826
8D3ub 227 4,74767
8DyGL 178 5,15953
8EgEq 235 5,14088
8F108 193 4,22691
8GH7V 177 7,82171
8Gxro 232 7,78141
8ksUy 243 5,85472
8mIl7 277 5,96840
8n211 277 6,99531
8yiuq 228 7,05124
8zg6P 237 5,05096
HXls 183 4,99685
dOdF 237 5,53051
qrZk 308 6,38406
rAif 297 9,66376
t1mw 206 9,43052
uUQ6 221 7,91912
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_15859
4qVem
 5 51,5% 188 1.384E-66
2 phalp2_7997
Z4sQ
 5 42,8% 175 7.398E-51
3 phalp2_25553
3Bw8Q
 1 39,0% 169 5.029E-41
4 phalp2_9906
2Hnje
 10 35,0% 180 2.180E-39
5 phalp2_13016
426A1
 31 37,6% 186 2.984E-39
6 phalp2_1444
1DO8y
 138 36,4% 195 4.085E-39
7 phalp2_37851
4LyyS
 5845 33,7% 172 4.075E-36
8 phalp2_12946
360Ik
 1926 29,4% 173 1.956E-35
9 phalp2_23908
1Le4q
 257 32,1% 174 6.158E-34
10 phalp2_12184
6C2VC
 988 35,8% 187 1.577E-33

Domains

Domains
PG_3
Representative sequence (used for alignment): 8CpUp (195 AA)
Member sequence: 2RdIM (219 AA)
1 195 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF05838|PF09374

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (8CpUp) rather than this protein.
PDB ID
8CpUp
Method AlphaFoldv2
Resolution 87.86
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50