Protein

Protein accession
1GVDc [EnVhog]
Representative
1GVDc (this protein)
Source
EnVhog (cluster: phalp2_12626)
Protein name
1GVDc
Lysin probability
98%
PhaLP type
endolysin
Probability: 84% (predicted by ML model)
Protein sequence
MEKLTKDKLREWLYLSLLIFVVCYVVYHTFPFPSTVLYKLGLKKTDAIVELSGFGAFLSYATLGLLLFRFCVAYMFPGWDMKRFRDATAWPDAGPRVWSAVILAIALIIAASIAKAETRTEPPRHLTIALQYEGIKEVPANSNRGKEVEMFLRSVGLGPGYPWCAAAVSFCLNRANVREPLINSAMAKAFITQKSIKASDVLSGKFHVPDGSIVIWQRGTGPFGHVGFVLKQQSNKEFTTIEGNTSSGEKGSQFDGGGMYRRKRSISLTDHFRITHFTLVSYL
Physico‐chemical
properties
protein length:283 AA
molecular weight:31576,4 Da
isoelectric point:9,58
hydropathy:0,08
Other Proteins in cluster: phalp2_12626
Total (incl. this protein): 12 Avg length: 265,3 Avg pI: 7,18
Protein ID Length (AA) pI
13m8z 289 8,32134
1Ihxf 266 5,51312
24XLP 263 4,97275
4U2sF 275 9,57744
6AMhj 253 9,22093
6AN0s 251 6,42351
7ppBO 266 5,60315
7rO8u 266 5,23455
7rQTL 260 6,16785
Il8Z 247 9,56596
eIv9 264 5,96766
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_28163
fkdY
 23 32,3% 204 1.188E-26
2 phalp2_40005
1XrwF
 16 35,8% 187 1.613E-26
3 phalp2_2056
2Gyja
 6 29,4% 180 7.174E-16

Domains

Domains
Disordered region
Unannotated
CHAP
Protein sequence: 1GVDc
1 283
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF05257

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1GVDc
Method AlphaFoldv2
Resolution 78.96
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50