Protein

Protein accession
2D38u [EnVhog]
Representative
2nrkU
Source
EnVhog (cluster: phalp2_3252)
Protein name
2D38u
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MQLRSPIQRNYFNNRKYCLVNQWFGENKNALFYGPLGHNGVDFKTQGPFKYLFNKLTGFLRSDKDSNEQKGLIPIVAAHDGYVTSPENADKDRGIYVRITDASEPTYETLYFHLDKIRVYRDDKYGGGWSDLKGGDFIKAGTVIGWGGNTGKYTTGAHLHFGLYKNKVAIDPMPFFQDNVVYTKVFMSKNQYIYQGKSISKEEVNNLNFNA
Physico‐chemical
properties
protein length:211 AA
molecular weight:24131,9 Da
isoelectric point:9,17
hydropathy:-0,63
Representative Protein Details
Accession
2nrkU
Protein name
2nrkU
Sequence length
162 AA
Molecular weight
19044,47940 Da
Isoelectric point
10,05863
Sequence
MYFFSNILNYIRRKTRGVEAQRGIIPIVAAHDGVLSAGFNDNYKEGIYMKIRSTDDKAYETLYFHLSKLRVWRDDERMTGWERRNGRNYVKAGAIIGWGGNSGRYTTGPHLHFELRKNNKSIDPMPLFKDNIIYQRYRGMSGSDWFYKGIKRTRKYINSLNA
Other Proteins in cluster: phalp2_3252
Total (incl. this protein): 2 Avg length: 186,5 Avg pI: 9,62
Protein ID Length (AA) pI
2nrkU 162 10,05863
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_28636
8qmsE
 11 40,2% 134 4.022E-24
2 phalp2_24104
8fsA2
 7 40,5% 101 3.142E-09
3 phalp2_16333
5o2Lb
 1 33,6% 101 1.253E-07
4 phalp2_33728
USFX
 3 24,6% 126 3.137E-07

Domains

Domains
Disordered region
PET_M23
Representative sequence (used for alignment): 2nrkU (162 AA)
Member sequence: 2D38u (211 AA)
1 162 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01551

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
2D38u
Method AlphaFoldv2
Resolution 84.14
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (2nrkU) rather than this protein.
PDB ID
2nrkU
Method AlphaFoldv2
Resolution 72.49
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50