Protein

Protein accession
2Cm3f [EnVhog]
Representative
YReD
Source
EnVhog (cluster: phalp2_26283)
Protein name
2Cm3f
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MPSLSDVHNALANAFRLAVSNYREAHSSRTIAVVGTVRSLASQKRAFSGGKSKLDGVVRPSIHQFSPKTPAMDCWVYDVIDPDAVPDEGFFEGRPRELERAGKLKLILIPGKLTQKAITREYLSWGYIAQETPVCGFPWESKLVWGGTWSQPHNADRLKKARFFDGPHLELARRDLTYEVQRMLDLAGYPPGPLDGIVGRKTKRAFKAYAEGRGIEVAYVPRRRTFPFRTSAWEALCTDTEHLS
Physico‐chemical
properties
protein length:244 AA
molecular weight:27403,0 Da
isoelectric point:9,53
hydropathy:-0,42
Representative Protein Details
Accession
YReD
Protein name
YReD
Sequence length
236 AA
Molecular weight
26947,52690 Da
Isoelectric point
9,42052
Sequence
LPILDDAHPILRARFQAAAKAYAEKNRDRALRVRQSTRGLSEQLNAFLKGTSKLDPRKVPSMHLFNPSLAIDVWIYQVAPKDQPEFGFWQTKPPVSAQLILSPNDRFSSAEITSEYRRWGYEAQSFPDAYWLKDARLIWGGSWKEAEKLDRWKLPKFFDGPHIQLSSKCCVFEAQRLVKKADFNPGGLDGVWGPKTRNAIAGFCASRSIEFHLVSKRKFPLMPDVWAALWELDDGA
Other Proteins in cluster: phalp2_26283
Total (incl. this protein): 3 Avg length: 241,3 Avg pI: 9,51
Protein ID Length (AA) pI
YReD 236 9,42052
w2QC 244 9,57725
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_17509
5uf3F
 29 29,5% 227 3.959E-20
2 phalp2_20991
7z7vn
 2 25,7% 245 8.719E-06
3 phalp2_38340
uXmy
 379 20,3% 255 2.824E-04

Domains

Domains
Unannotated
Representative sequence (used for alignment): YReD (236 AA)
Member sequence: 2Cm3f (244 AA)
1 236 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (YReD) rather than this protein.
PDB ID
YReD
Method AlphaFoldv2
Resolution 82.29
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50