Protein

Protein accession
24pdu [EnVhog]
Representative
6g5Nk
Source
EnVhog (cluster: phalp2_8082)
Protein name
24pdu
Lysin probability
95%
PhaLP type
endolysin
Probability: 85% (predicted by ML model)
Protein sequence
MLKGNVTIGEAVCNENGKATGGKAGDQTGRELRFTRLSDNFKFTHIYRFTDEKAADLCVRKIVKVINSNCCGYSQMLNHRTSLADELVKYNWNVGKMIANGAKVEADCSSLVACMVKALQAKFGQSYNISKNAYSGDLGDLLMRTGKFIRIDVDRVKLGKMSLKKGDILIRPYHHVAIVVSV
Physico‐chemical
properties
protein length:182 AA
molecular weight:20112,2 Da
isoelectric point:9,47
hydropathy:-0,18
Representative Protein Details
Accession
6g5Nk
Protein name
6g5Nk
Sequence length
168 AA
Molecular weight
18940,95770 Da
Isoelectric point
9,84498
Sequence
MALLCGWASQSEKRTVNGRKGDQTGKEVKLGSYYNFGQDKIIRFRNSSRGRKAARAQKLFCLNDNIGYGQNDRTSLYSQCKKINWDITKIPQIKKCNCDCSELVACSINMAYGKEIMPSSTTTASLFNLTIVKRPKNFKTTKLCSKKKPGDMILKAGKHVIMVLEKEK
Other Proteins in cluster: phalp2_8082
Total (incl. this protein): 31 Avg length: 171,0 Avg pI: 9,74
Protein ID Length (AA) pI
6g5Nk 168 9,84498
1HoV3 168 9,79425
1kAwF 185 9,53051
21nuj 169 9,96077
3TDSe 167 9,84531
3TFwz 168 9,80534
3gQII 168 9,87380
41ceD 173 9,38893
4xDBy 181 9,59633
4y9FP 168 9,62560
4ysKA 168 9,66770
5VdWv 168 9,77020
5lxV 171 9,46662
66IGc 166 9,66744
69pRe 168 9,84498
6ZbLq 185 9,86942
6gqEg 166 9,70625
6iFs3 168 9,82352
6uWvn 168 9,82313
7JGNN 168 9,98965
7WED1 173 9,73436
7X8Jz 168 9,79425
7YYky 168 9,89888
828Dw 167 9,79811
84ix0 177 9,21861
87Ru8 174 9,64436
8eNvj 173 9,82680
8mlvw 167 9,71785
8rUZD 173 9,69671
a3No 168 10,22625
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_14958
q7W9
 544 31,9% 163 9.373E-33
2 phalp2_17024
8fzIh
 11 41,1% 119 1.964E-30
3 phalp2_15414
23rlq
 22 31,3% 169 2.697E-27
4 phalp2_39343
4y4JW
 1 30,3% 178 9.467E-27
5 phalp2_14665
5SdMy
 14 43,1% 109 3.322E-26
6 phalp2_34838
3VECK
 1 28,7% 167 3.322E-26
7 phalp2_27947
F3FN
 52 24,4% 176 4.035E-22
8 phalp2_11769
7VlRi
 178 24,6% 166 8.238E-20
9 phalp2_19270
84Tjp
 100 31,9% 169 3.930E-19
10 phalp2_20439
3nCW3
 18 27,9% 161 1.873E-18

Domains

Domains
Unannotated
Representative sequence (used for alignment): 6g5Nk (168 AA)
Member sequence: 24pdu (182 AA)
1 168 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (6g5Nk) rather than this protein.
PDB ID
6g5Nk
Method AlphaFoldv2
Resolution 95.19
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50