Protein

Protein accession
3pidJ [EnVhog]
Representative
3pidJ (this protein)
Source
EnVhog (cluster: phalp2_31451)
Protein name
3pidJ
Lysin probability
99%
PhaLP type
endolysin
Probability: 97% (predicted by ML model)
Protein sequence
MRIELTKPYTRGADVRHVQERLVAHGYRVATDGIYGPASCNAVKAVQALYGLTVDGIVGDKTLAVLDAPPLIIVQPSKHAKDLVTFMYSLLEEIYLWGGFGQELNAENVNAVALKMDTSSANAKRTVALFEKKAKWGLTNMHGYDCSGAISRGLYKMGMVDKKRNCNHLWDMCEEITRERLIPGDLLFRQRSGGDNYHVGVYVGDGKVIEAKGRDDGVVIRGIYKSGTGYWNKFGRLRCLYENA
Physico‐chemical
properties
protein length:244 AA
molecular weight:27095,8 Da
isoelectric point:8,97
hydropathy:-0,25
Other Proteins in cluster: phalp2_31451
Total (incl. this protein): 11 Avg length: 289,5 Avg pI: 7,92
Protein ID Length (AA) pI
2lxiH 225 9,69613
3nmdD 237 9,63411
5Sgp9 341 8,19898
5VHgf 269 6,60397
5VgQA 341 6,80422
6mE2q 244 8,99452
6nMQy 341 7,09086
6owCL 341 7,09086
6t3pd 341 7,67653
8ldiL 261 6,38657
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_21765
3WyXw
 205 39,1% 171 7.462E-42
2 phalp2_13320
3PD8H
 22 37,3% 166 1.191E-37
3 phalp2_40165
8lvEw
 22 30,1% 159 2.155E-27
4 phalp2_31731
3P98Z
 2 29,6% 162 2.058E-15
5 phalp2_31501
3TJjZ
 324 27,3% 161 1.896E-13
6 phalp2_23979
3u8Hb
 4 26,2% 221 8.505E-13
7 phalp2_33018
4k89Y
 16 22,2% 247 1.270E-05

Domains

Domains
PG_1
NLPC_P60
Protein sequence: 3pidJ
1 244
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00877, PF01471

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3pidJ
Method AlphaFoldv2
Resolution 95.48
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50