Protein

Protein accession
3nHDC [EnVhog]
Representative
3nHDC (this protein)
Source
EnVhog (cluster: phalp2_1833)
Protein name
3nHDC
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSNFKSFNKDTFKAYIDGLKVTRRIKIVQLHHTYIPSYKQFNGSNHEAVQTGMRNTHIKTNGWSDIGQHFTIFPDGVILTGRNINTAPAGIKGANSNGICIECVGNFDKGGDVMTDAQKTAIIAVTKILLDKFGLNAKTGVTYHAWWTSGGTALGTYIAGRSAKTCPGTNFFGGNTREAYEKNLMPFIENYGKVENNMALKPITEINDIVWELANAGIISDSNLWIEKCKEDNNVYWLCRKMANKLRGTL
Physico‐chemical
properties
protein length:250 AA
molecular weight:27723,3 Da
isoelectric point:9,20
hydropathy:-0,32
Other Proteins in cluster: phalp2_1833
Total (incl. this protein): 39 Avg length: 241,1 Avg pI: 8,27
Protein ID Length (AA) pI
13uyr 227 8,97131
1gKu2 195 6,43164
1oBuy 230 9,26380
1r6f9 225 9,05389
2deAn 248 9,04371
3YjUI 196 5,58400
3m2Z3 186 7,79321
3nSp2 204 9,36076
44XCL 241 5,83909
45mxU 244 8,91606
4eX05 205 9,54385
4lFEn 286 9,17058
4ugtB 263 8,52809
5EX1A 195 6,43477
5S4ZV 277 9,12468
5hPYo 228 8,73890
5hUM0 229 8,89511
5hWfW 177 8,60300
5jSci 241 9,49337
62wP2 277 9,19340
6PvDR 227 8,82690
6awHe 277 9,03829
6jsG1 277 9,19340
71ClT 286 9,00096
74iOn 228 9,00129
7Tc5o 191 5,47589
7k4pO 231 9,04603
7rTSl 277 9,19340
7rZvl 260 9,43380
80Dl0 270 5,97960
868WV 256 8,26274
8e8vQ 249 5,52216
8fO6A 256 8,25577
8nvkd 256 7,72620
8sxH2 258 7,73024
n8cC 259 8,25777
ojLI 260 6,36559
oqWt 260 9,01160
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_13875
7wN5l
 37 49,2% 191 5.402E-75
2 phalp2_22280
7vPye
 4 43,5% 156 1.027E-56
3 phalp2_7546
5i1mG
 22 33,0% 215 2.445E-44
4 phalp2_13177
2nG2h
 13 33,5% 161 1.170E-28
5 phalp2_35354
7vHgi
 29 26,3% 197 1.535E-16
6 phalp2_37356
8qdpv
 23 25,4% 153 2.122E-13
7 phalp2_1638
8s39A
 1 19,7% 187 2.517E-11
8 phalp2_12934
2XGYf
 62 27,2% 154 2.861E-09
9 phalp2_5561
3TYtn
 1 25,1% 167 2.861E-09
10 phalp2_32334
8DzzK
 2 22,2% 157 2.861E-09

Domains

Domains
Ami2
Unannotated
Protein sequence: 3nHDC
1 250
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3nHDC
Method AlphaFoldv2
Resolution 94.59
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50