Protein

Protein accession
1DPdR [EnVhog]
Representative
1DPdR (this protein)
Source
EnVhog (cluster: phalp2_32561)
Protein name
1DPdR
Lysin probability
99%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MLRILLQRLKIKGNSAYIKVDPTGFVVPEKALLYPPAAKAFNQYLDWMAAERELHPLVNDCFRSPQEQIEIKKKKPTLAYLPGQSGHNWGISVDLSTALLRQEATKNGIKYATMREDLARFGWTPSPKEAWHFNFLEGRAGIQDWVSFKYGTAWDGADDLPAHDLQQALQKLGYYNFDTIKAVQAFQKDYMLDIDGKVGPNTRKVLLIATAELSIIS
Physico‐chemical
properties
protein length:217 AA
molecular weight:24571,9 Da
isoelectric point:8,81
hydropathy:-0,33
Other Proteins in cluster: phalp2_32561
Total (incl. this protein): 5 Avg length: 233,6 Avg pI: 7,37
Protein ID Length (AA) pI
3hh43 241 6,60091
4AV4F 244 9,37746
4BDAY 240 5,32805
bhYW 226 6,71657
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_21786
47VGy
 26 25,7% 229 2.989E-29
2 phalp2_27561
5zz87
 24 26,0% 161 3.034E-12
3 phalp2_39383
4Iop0
 2 26,2% 183 2.519E-11
4 phalp2_9828
8iWLG
 9 22,9% 227 2.131E-06
5 phalp2_23075
4kW5M
 8 24,0% 216 1.732E-04
6 phalp2_20991
7z7vn
 2 22,4% 174 5.550E-04

Domains

Domains
Disordered region
PG_1
Protein sequence: 1DPdR
1 217
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1DPdR
Method AlphaFoldv2
Resolution 79.77
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50