Protein

Protein accession
20rdK [EnVhog]
Representative
5kHci
Source
EnVhog (cluster: phalp2_39503)
Protein name
20rdK
Lysin probability
70%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
ISDKKLVGNQLQTVVQGTTFTTKEAEDTLKYEIATDYSKRVIRAIGQEAWDKISDNQKAALTSFAYNAGTAYPGIFGAVKSGNYNEAAQLIAAGPYTSEGKYMAGLETRRKEESALFNKTT
Physico‐chemical
properties
protein length:121 AA
molecular weight:13197,6 Da
isoelectric point:8,08
hydropathy:-0,52
Representative Protein Details
Accession
5kHci
Protein name
5kHci
Sequence length
113 AA
Molecular weight
12620,40400 Da
Isoelectric point
10,24791
Sequence
VSNVTNSTVFTREDAERTLRYNIVTRFQNDIIKRIGKSIWEGLKDNQKAALVSFTYNAGIGAFGYNGLDTALKTKKPSQTIASIIEKGPITSRGKVLQALVKRRKKEASLYLK
Other Proteins in cluster: phalp2_39503
Total (incl. this protein): 4 Avg length: 124,0 Avg pI: 8,22
Protein ID Length (AA) pI
5kHci 113 10,24791
14I2w 108 6,08850
15uB8 154 8,46065
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_2632
6RhYr
 14867 34,2% 114 6.331E-16
2 phalp2_4451
31DIk
 4919 35,6% 101 1.086E-14
3 phalp2_31105
1YRHZ
 456 38,1% 110 1.862E-13
4 phalp2_37101
1bvx6
 877 31,1% 109 4.798E-13
5 phalp2_33221
5jbqV
 447 32,1% 109 6.579E-13
6 phalp2_7764
77796
 37 42,4% 73 2.324E-12
7 phalp2_20456
3zJV8
 14 35,2% 71 5.988E-12
8 phalp2_36671
45c7P
 9 23,4% 115 2.898E-11
9 phalp2_15074
7BwGK
 4 32,9% 91 7.461E-11
10 phalp2_39267
4724r
 247 35,4% 110 7.461E-11

Domains

Domains
GH24
Representative sequence (used for alignment): 5kHci (113 AA)
Member sequence: 20rdK (121 AA)
1 113 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00959

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5kHci) rather than this protein.
PDB ID
5kHci
Method AlphaFoldv2
Resolution 96.34
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50