Protein

Protein accession
1zkjM [EnVhog]
Representative
gsY5
Source
EnVhog (cluster: phalp2_17841)
Protein name
1zkjM
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VGRTDAVQFTLECAAEWRRLGALVTFEAGWETRGNGTRANYEGTNQHHTATPSSLTRPFPTRSMLISGRTGLPGPLCNEATPVGPGDRPHIHVIAAHPANHAGASGGKSTSPMPVTTLYNPRSRGNEIDYAGDRPMTPGQYRAALIHGRGVVNVLGRGVEYIKAHAETSATGKWDPGYAPGKTIDMVAFRRDAATLSASPVEPSPTVATQEDTMPVRIEPGESRRFPTWPGPSKFRLNIVTGSVEGQPVYGKQVFSPDKAVGLFYKMWEGPDEWTKFLGHGQNVQVELQPGCLFAEVENQGTGPIDVTFTGA
Physico‐chemical
properties
protein length:312 AA
molecular weight:33544,2 Da
isoelectric point:7,26
hydropathy:-0,46
Representative Protein Details
Accession
gsY5
Protein name
gsY5
Sequence length
325 AA
Molecular weight
34301,92830 Da
Isoelectric point
4,88556
Sequence
MVSVRQVVDRLREVGLTVHEWPGWDGRGNEGVGQIDPRGAVLHHTGSAYGNAYQTLVTGRADLPGLLCNFAGNADGTLTVVGSGLAWHAGPGGGPNLGPLAQFGTRLNRQTLGLEIVYPGYQAMTAAQRHAALVFSAVVAELCSGGDVSWIRGHGEVSSEGKWDPGRGDGTSRMIDMGAFRQEASTILNAEDEMLTPNDGNTRWAAANPYLPDNSPNKVETHPVASWVGWSAFHGLEAVRLGRLSLAILTDLANDPDITPAALEDIVRRSDAEHAPVVASMVVAGVNAEISDLVREALEKVQEDDSDSDVAALLRRIAGLVPAPA
Other Proteins in cluster: phalp2_17841
Total (incl. this protein): 11 Avg length: 307,4 Avg pI: 7,35
Protein ID Length (AA) pI
gsY5 325 4,88556
11D3I 309 7,05152
4Xxdl 311 8,38058
5BE86 309 5,98659
5BkxO 274 8,83154
6THue 308 6,37065
6TKg9 312 6,13971
6x3M6 306 8,99297
7nSYe 306 8,58076
brQA 309 8,40495
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_17989
1fclU
 3 56,9% 216 3.208E-66
2 phalp2_1114
7zk0Q
 3 27,9% 351 2.631E-30
3 phalp2_28020
6Vxjq
 39 28,7% 303 8.948E-25
4 phalp2_21923
4LFwQ
 4 29,6% 243 9.800E-21
5 phalp2_2847
8LyZr
 374 28,1% 305 2.592E-19
6 phalp2_12024
7Qd9Y
 81 29,4% 221 7.165E-17
7 phalp2_19071
1jII3
 225 26,6% 248 1.733E-16
8 phalp2_9416
8Lrse
 65 31,2% 262 1.107E-12
9 phalp2_33273
5GVax
 183 22,6% 252 6.291E-10
10 phalp2_27530
5kmGt
 2 26,2% 217 3.245E-06

Domains

Domains
Ami2
Representative sequence (used for alignment): gsY5 (325 AA)
Member sequence: 1zkjM (312 AA)
1 325 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1zkjM
Method AlphaFoldv2
Resolution 78.72
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (gsY5) rather than this protein.
PDB ID
gsY5
Method AlphaFoldv2
Resolution 71.89
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50