Protein

Protein accession
3dVmz [EnVhog]
Representative
3dVmz (this protein)
Source
EnVhog (cluster: phalp2_2108)
Protein name
3dVmz
Lysin probability
99%
PhaLP type
endolysin
Probability: 95% (predicted by ML model)
Protein sequence
MNIAIYIYEQCIKYGLTKEAACAILGNIQEESGFNPMNLEDRANKALGLTDVQYTAKVDSGEWDDFATDHGVYGGYGLCQWTYPDRKRLMLSFAKNYGASIGDYKMQVAFMLWEFKKSFPAILQKLMTSHDLEELVHELLYKWENPAEKTNNMVRRLANAKKFYEVVKNADDSQIINGTNDPEPANVTNDIVEKYVTAAIAIANDNSHGYSQANRWGPDFDCSSLVITVVQYAGVPVKDRGATYTGNMRKVFLSCGFTDVTSRCTLANGNGMQRGDILLNDMNHAAIYIGNGMIVHARSAEGNSIQGDQSGNEIRTQAYFNYPWNIVMRFTHGGIVTKPTTSTNNDVSEHDSNVSLLRKGSKGANVKVLQQKLIELAYDLDGRVVVNGNYDDATEAAVILFQKEHDLEVDGIFGPKTFSAMKIASPRAGYTPYIKPDERPVQIVPINTIVRFTGDRCYTSANSNVPRLCKPGKAKITKVQERSKHPYHLVRILFGGSTINGWVSREDFEVI
Physico‐chemical
properties
protein length:511 AA
molecular weight:56978,8 Da
isoelectric point:6,44
hydropathy:-0,37
Other Proteins in cluster: phalp2_2108
Total (incl. this protein): 7 Avg length: 447,9 Avg pI: 6,71
Protein ID Length (AA) pI
21Cma 468 9,06259
2mwJG 469 9,08297
3gXz3 434 8,22805
3nIyg 353 4,48246
5ipt7 477 4,75637
6kA3E 423 4,94445
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_17255
3VKDd
 14 47,4% 327 9.595E-77
2 phalp2_12591
1ntYC
 157 36,5% 342 4.576E-74
3 phalp2_8960
3yCnS
 526 26,4% 521 5.380E-73
4 phalp2_25258
7XZmQ
 197 26,3% 535 1.007E-70
5 phalp2_40594
7DPnE
 7 25,5% 501 2.865E-61
6 phalp2_9561
1gCbl
 21 27,5% 519 5.277E-61
7 phalp2_37779
4y6Ge
 6 26,3% 417 1.673E-56
8 phalp2_10791
3TOpr
 2 22,2% 553 2.647E-47

Domains

Domains
Phage_lys2
NLPC_P60
PG_1
Unannotated
Protein sequence: 3dVmz
1 511
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00877, PF01471, PF18013

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3dVmz
Method AlphaFoldv2
Resolution 83.06
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50