Protein

Protein accession
3dVAF [EnVhog]
Representative
3dVAF (this protein)
Source
EnVhog (cluster: phalp2_10721)
Protein name
3dVAF
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VAKFGADISRYDRDISIPRLRDDGVEFVIVKCGGGDDGLYADSWFERNYQKCIDNKMPVGAYWYSAAHDVETAKREADYCVRLLNGRHLDYPVWMDVEDRTHQLMCTNQPGLLGRIIDAFCSRIVEAGYRTGIYSWKWLLDPCGSAIAPYDRWVCAWTRSKPSGQVDLWQFGGEENVIRSTSLAGHDPVDQDYAYTDYISMGGWPKKSAGEANTDNLMISVEGRNTVVWFSNGTIHDLSHPDDMNVLGMVARACGCDLRLLTVTPDEYARLCQSTKAGLPKHLSECNDKFKPRS
Physico‐chemical
properties
protein length:294 AA
molecular weight:33129,9 Da
isoelectric point:5,40
hydropathy:-0,43
Other Proteins in cluster: phalp2_10721
Total (incl. this protein): 2 Avg length: 295,0 Avg pI: 4,99
Protein ID Length (AA) pI
3h6ZV 296 4,58881
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_31512
3WNwM
 280 42,6% 230 1.685E-39
2 phalp2_529
o3Q8
 73 41,5% 207 2.078E-36
3 phalp2_26548
858CP
 728 35,9% 220 1.870E-31
4 phalp2_23789
19iit
 3 36,1% 221 7.457E-30
5 phalp2_11218
6q99m
 1 35,7% 190 1.872E-29
6 phalp2_6199
5X5xO
 102 33,9% 209 6.378E-29
7 phalp2_3425
3TK4D
 923 33,0% 200 8.665E-29
8 phalp2_34702
2Vinc
 3 31,1% 202 1.119E-24
9 phalp2_37848
4L2Bj
 9 31,0% 203 1.948E-22
10 phalp2_27173
3dR30
 17 29,3% 201 3.568E-22

Domains

Domains
GH25
Protein sequence: 3dVAF
1 294
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3dVAF
Method AlphaFoldv2
Resolution 78.74
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50