Protein

Protein accession
3bGdW [EnVhog]
Representative
3bGdW (this protein)
Source
EnVhog (cluster: phalp2_6995)
Protein name
3bGdW
Lysin probability
63%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MIKIVYLSLYQAYGHLINGPLLKENVSAVMIRGGQGIWKDPEFDYNYSIAVDNGIPFGIWWFNQPNMTAQPQTDAFLSLWNSLPKRPIVVAYDVEEIDYRDSNGNLQKLFPPSVDFSHKNTLEWCMNIADETKAAVGIYTRKNYFETWTKNVPEWQKFWLWIAAWYQYTGAVAPALPRPWTTYRIHQYEGGGLGTPGVDPLNTCKEYWNGSLESCLRFFGASAPPPTDDIEALKAKLAEWEAWYGDAPAGG
Physico‐chemical
properties
protein length:251 AA
molecular weight:28577,0 Da
isoelectric point:5,01
hydropathy:-0,34
Other Proteins in cluster: phalp2_6995
Total (incl. this protein): 5 Avg length: 277,8 Avg pI: 5,12
Protein ID Length (AA) pI
2CRPd 270 5,85398
4FqrS 302 4,80548
4Jy3E 263 4,98207
4TcWL 303 4,96832
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_26214
jZqY
 82 25,5% 243 2.303E-26
2 phalp2_39912
1jXPT
 300 22,3% 228 9.298E-25
3 phalp2_29268
hFI3
 21 25,9% 204 1.087E-21
4 phalp2_6394
5NLU
 30 25,7% 252 2.316E-20
5 phalp2_10644
2AeOK
 60 25,0% 200 3.143E-20
6 phalp2_40221
2t2YG
 45 25,7% 237 4.894E-19
7 phalp2_10418
1ZuZp
 8 28,1% 238 1.220E-18
8 phalp2_1137
5J3v
 11 23,7% 244 4.118E-18
9 phalp2_5862
5yfd0
 6 24,1% 236 1.388E-17
10 phalp2_5144
1Zty9
 17 25,3% 249 3.449E-17

Domains

Domains
GH25
Protein sequence: 3bGdW
1 251
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3bGdW
Method AlphaFoldv2
Resolution 87.75
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50