Protein

Protein accession
3apD5 [EnVhog]
Representative
3apD5 (this protein)
Source
EnVhog (cluster: phalp2_6991)
Protein name
3apD5
Lysin probability
99%
PhaLP type
endolysin
Probability: 92% (predicted by ML model)
Protein sequence
MYSLTDFLKHVQDIAAANPVYVNGGLTRSKLDCVGLPMLAMKELGRKSYDMHSSNYFYRYQVDDLVQITGEEDVYLGMLLFKTRSDEETGYDLSTTYITGRYNTGDYLDAYHVGIVTGVHPLEITECTSTGLASGIKITSKLGSPSRGGWDCGGKLKGIDYEDYDGEGDTVMELTGKTCIVTGGALNLRESKNTASIRICLIPEGTNVYCYEDDGTWSRIKYDVSGKTYTGYVKSEFLSESIDGATTNEDSSSAESGVTLKLTMAEAEMLKAVLSRL
Physico‐chemical
properties
protein length:277 AA
molecular weight:30341,7 Da
isoelectric point:4,73
hydropathy:-0,29
Other Proteins in cluster: phalp2_6991
Total (incl. this protein): 64 Avg length: 262,3 Avg pI: 6,27
Protein ID Length (AA) pI
13780 283 6,45960
13yMF 268 5,71268
1FDoD 274 5,94163
1GK8p 258 5,53461
1l90p 262 6,00734
1nooC 203 5,02607
21J61 289 5,32424
24HNY 198 5,40240
2R09x 270 6,20627
2c0EN 259 5,47527
2oISG 261 5,26041
3TFM9 263 5,16606
3TJOu 305 4,89380
3TLwY 266 9,10908
3TO9v 278 5,05426
3WJ7E 268 8,72794
3ZBm6 245 9,55926
3ZLdq 247 9,27792
3Zs0P 243 9,37095
3ZsC4 271 4,82082
3ZxkE 270 5,67341
3a5kh 232 6,20661
3dRre 262 6,06236
3dUga 263 8,97479
3e7wZ 261 9,14002
3fVYC 290 5,11832
3gK0H 238 9,28978
3gOe4 276 5,77890
3kSkb 271 6,66707
3lIai 272 7,71899
3nRgq 261 5,89741
3nRlu 261 5,27622
3nVUW 228 4,98997
3sQT1 272 7,71881
3uPGo 264 4,99873
3wR6N 272 7,12797
3wfEH 269 5,90815
3y3qL 282 4,56169
3y6sO 270 6,03286
40eHA 280 4,80252
41eUf 220 4,85248
5LAoX 272 6,72447
5Lu8 273 5,61736
5McIx 268 5,50096
5PFZ3 261 5,14594
5e2o8 251 6,67139
60cL1 269 6,17103
6Z6uI 268 6,03286
6eJeE 269 5,53455
6jHkQ 272 7,71614
6kSwh 272 7,16276
6lhSj 269 5,53256
6tuRC 268 5,50101
7DNpQ 238 9,05234
7JA6D 256 5,98972
7MHql 261 5,14594
7YWxL 274 6,66667
84qsJ 265 5,14588
8cCXx 269 5,70694
8cGr4 268 4,96036
9ulD 273 5,55683
ZIFJ 270 8,78835
yfRL 202 4,81815
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_17568
6bVpI
 247 31,5% 241 4.220E-74
2 phalp2_5570
3WI9c
 1 20,4% 245 2.002E-35
3 phalp2_17704
71inw
 139 28,1% 217 1.874E-28
4 phalp2_22652
21GIP
 5 18,8% 217 5.441E-25
5 phalp2_33312
6ofjo
 31 20,0% 255 1.767E-17
6 phalp2_11199
69s4u
 23 24,7% 194 2.484E-13
7 phalp2_22095
5ZdbS
 95 21,6% 250 1.465E-12
8 phalp2_29665
8rAee
 1 22,4% 276 6.396E-12
9 phalp2_3087
3ussr
 2 17,8% 219 3.993E-09
10 phalp2_21765
3WyXw
 205 21,0% 238 9.476E-05

Domains

Domains
Unannotated
Unannotated
Disordered region
Protein sequence: 3apD5
1 277
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3apD5
Method AlphaFoldv2
Resolution 84.44
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50