Protein

Protein accession
3YcD8 [EnVhog]
Representative
3YcD8 (this protein)
Source
EnVhog (cluster: phalp2_13335)
Protein name
3YcD8
Lysin probability
96%
PhaLP type
endolysin
Probability: 97% (predicted by ML model)
Protein sequence
MYPEAAHCGHRDLSPDRNGDGKITRSEWLKACPCFDVETELL
Physico‐chemical
properties
protein length:42 AA
molecular weight:4762,3 Da
isoelectric point:5,04
hydropathy:-0,69
Other Proteins in cluster: phalp2_13335
Total (incl. this protein): 7 Avg length: 49,4 Avg pI: 7,03
Protein ID Length (AA) pI
1IQ3l 59 7,98984
1qtvP 49 8,00879
3il2e 42 5,61651
4f9YS 37 4,99674
7NbJX 49 8,68352
pQ09 68 8,90748
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_6068
4VCVJ
 11 70,0% 40 3.098E-17
2 phalp2_7551
5jCV4
 5 62,5% 32 2.153E-12
3 phalp2_27175
3dTih
 1 40,6% 32 2.487E-04

Domains

Domains
Unannotated
Protein sequence: 3YcD8
1 42
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3YcD8
Method AlphaFoldv2
Resolution 76.67
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50