Protein

Protein accession
3YPMB [EnVhog]
Representative
3YPMB (this protein)
Source
EnVhog (cluster: phalp2_30207)
Protein name
3YPMB
Lysin probability
96%
PhaLP type
endolysin
Probability: 97% (predicted by ML model)
Protein sequence
MMARYAAGSTRRLGDIAAQQMQQGQGQQSPMMQSQPMQEGLDPEFDAAVQAMIADAPPEIRAQLGIGSGYRSIDEQQGLYDQAMATYGRNDLPGHQVAKPGASQHNFGMAADLKFASPEAKAWVQENAARYGLHFPVTGEDWHIELMNGRSRQMASPMANYRGM
Physico‐chemical
properties
protein length:164 AA
molecular weight:17946,9 Da
isoelectric point:5,49
hydropathy:-0,62
Other Proteins in cluster: phalp2_30207
Total (incl. this protein): 2 Avg length: 165,5 Avg pI: 5,40
Protein ID Length (AA) pI
4JkOF 167 5,31970
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_36146
6QWnL
 7 41,9% 112 1.224E-21
2 phalp2_8281
btYP
 1 37,6% 125 4.508E-16
3 phalp2_38151
6VS8G
 32 29,8% 124 1.114E-06
4 phalp2_2044
2zxzD
 1 28,0% 125 2.048E-06
5 phalp2_6920
2GDF5
 10 27,9% 129 9.357E-06
6 phalp2_15634
2Dd0a
 83 32,5% 132 7.783E-05

Domains

Domains
Disordered region
PET_M15
Protein sequence: 3YPMB
1 164
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF02557

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3YPMB
Method AlphaFoldv2
Resolution 76.80
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50