Protein

Protein accession
1rgM4 [EnVhog]
Representative
5zIVL
Source
EnVhog (cluster: phalp2_19861)
Protein name
1rgM4
Lysin probability
97%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MMTKIKYITNEVESMLTLMTSTVEEQSVLIKQHLHEIDYIEKNSRKSEYRSLDDIKMVFGSFDYTEMSGGKIKINGNWTNENIKLLQVGYHKLWLHKLIHPQTAGALAEIISIGLDDKLNFHNGGGWVARHINWNPDKPLSKHAYGVAFDFSPQIYPYGENIKLHPEVSRILEKWGFYLGQNFTTPDTMHVEFSTFPI
Physico‐chemical
properties
protein length:198 AA
molecular weight:22888,9 Da
isoelectric point:6,35
hydropathy:-0,39
Representative Protein Details
Accession
5zIVL
Protein name
5zIVL
Sequence length
163 AA
Molecular weight
18449,96830 Da
Isoelectric point
8,56690
Sequence
MAEALKAPNGRAAIEEVFGELPWHSIPGSTFVRVDPLWEEEHLVGVFVDSFYIRMHKKLASLFVEALMAARAAASVYTLRQLGGYCPRRMKTLDPAKQAAAPLSTHSWGIAFDINWNSNPFSTKLITDIPAAFVEEFKKRGWNWGGDWRSKKDPMHFQFCTGY
Other Proteins in cluster: phalp2_19861
Total (incl. this protein): 30 Avg length: 184,0 Avg pI: 8,00
Protein ID Length (AA) pI
5zIVL 163 8,56690
15Adf 167 7,70125
15iP1 165 9,50685
1IcEp 242 6,19587
1WsUm 224 9,74738
1lw9D 167 7,88527
1oUKu 166 6,69941
1rjoU 191 8,67037
2Ahey 231 9,51136
2D214 216 7,18328
2rFWM 191 9,22899
2wDWb 199 10,01060
2zLHC 176 8,32437
3S51N 193 6,71231
3eHuj 240 9,16201
3hblM 155 6,36366
3hkpf 156 5,11388
3mI2n 189 6,06940
4NBn3 163 7,71199
4e7UZ 164 9,18019
4fLvO 158 8,28556
4vIXB 149 9,04229
5BdQq 176 6,53253
5nioZ 164 8,25049
5sR5L 164 8,74631
7HvGO 185 9,63024
8Abdy 247 10,00196
TlJI 163 7,70404
ULbq 158 5,92924
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_7463
4QPri
 21 35,0% 160 2.869E-39
2 phalp2_3013
1HC4t
 20 29,2% 181 9.173E-38
3 phalp2_23014
3S8Y1
 5 26,9% 163 5.067E-32
4 phalp2_32878
3eE2c
 24 32,2% 161 1.302E-31
5 phalp2_35627
1l2XB
 20 31,0% 161 4.583E-31
6 phalp2_28777
4SR8r
 700 27,3% 172 5.126E-29
7 phalp2_35615
1iltm
 50 31,3% 137 9.655E-26
8 phalp2_34386
4eYVt
 1 27,9% 154 2.477E-25
9 phalp2_21422
84qjx
 127 24,6% 166 3.390E-25
10 phalp2_19828
5klLF
 236 28,0% 164 1.465E-23

Domains

Domains
PET_M15
Representative sequence (used for alignment): 5zIVL (163 AA)
Member sequence: 1rgM4 (198 AA)
1 163 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF13539

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5zIVL) rather than this protein.
PDB ID
5zIVL
Method AlphaFoldv2
Resolution 96.59
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50