Protein

Protein accession
1rdsw [EnVhog]
Representative
6RRHo
Source
EnVhog (cluster: phalp2_33396)
Protein name
1rdsw
Lysin probability
98%
PhaLP type
endolysin
Probability: 94% (predicted by ML model)
Protein sequence
VADDLGRSRFATELLDPRVRDKLIAYIKAEVGGQGQNAWQAIAETFANRGVARNQTLDRVLSGDYFPQVTHQRAARPVTPADRAQYDPIIDKVLAGSNIANYATGNASGTVGFAGGPQTYASGGERYGIEGPDKGWWTRIGASGPGAAGSVPYTAAQPQTLAGLQSQAVPVAKPPGFMYKDFFNNGILGG
Physico‐chemical
properties
protein length:190 AA
molecular weight:19999,0 Da
isoelectric point:8,90
hydropathy:-0,35
Representative Protein Details
Accession
6RRHo
Protein name
6RRHo
Sequence length
192 AA
Molecular weight
20224,25430 Da
Isoelectric point
8,93095
Sequence
VPVADDLGRRRFAEELQDPRVRDKLLAYTKAEVGGQGPQAWQAFIETTLNRAVARRKSLADVLSGEYFPGVTHQRAARGVDQNTRAAYDPVVQSVLGGSNITNYATGNASGTVGFAGGPQTYAAGGERFGIEGPDKGWWTRIGAPGPGAAGSVPYTSAQPQTLAGLQSQMVPPPAKPGFTYKDFFENGILGG
Other Proteins in cluster: phalp2_33396
Total (incl. this protein): 4 Avg length: 190,5 Avg pI: 8,72
Protein ID Length (AA) pI
6RRHo 192 8,93095
36gft 190 8,13586
7G7N5 190 8,92199
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_25019
TyzF
 2 70,3% 152 1.213E-66
2 phalp2_28953
5IZKn
 2 52,0% 144 1.146E-34
3 phalp2_17362
4EIIo
 1 46,9% 147 4.938E-33

Domains

Domains
Unannotated
Representative sequence (used for alignment): 6RRHo (192 AA)
Member sequence: 1rdsw (190 AA)
1 192 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1rdsw
Method AlphaFoldv2
Resolution 73.67
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (6RRHo) rather than this protein.
PDB ID
6RRHo
Method AlphaFoldv2
Resolution 72.92
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50