Protein

Protein accession
1rdoD [EnVhog]
Representative
5BafP
Source
EnVhog (cluster: phalp2_36008)
Protein name
1rdoD
Lysin probability
97%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSGPMTLLMASKLEGFRDLAILVWRESRGESFDAQVAVAHSVMNRVRHPGWWGTDLLSVIWKKWQYSSLTDPNDPQIKLQPKLPDPSWLSGLGASYDVVYGDVENPAPGADSYYDISLDKIGKAPKWATADKFVKQLGRLKFYDLDEDHEAHALIAAAPAVAKDDFIDELRAFLAAPKG
Physico‐chemical
properties
protein length:179 AA
molecular weight:19886,4 Da
isoelectric point:5,33
hydropathy:-0,28
Representative Protein Details
Accession
5BafP
Protein name
5BafP
Sequence length
130 AA
Molecular weight
14694,34330 Da
Isoelectric point
6,07094
Sequence
VTDPVELLRRFAIALAVWREARGQSPLGLLLVAQTIENRVRDPRWPDTYVGVITQPLQFSAFNKNDPNATKFPAEDDRTWPDCVAAAEYVQHAPTPITTANHYHTRDVAPSWSREDKIVAREGAHVFYAL
Other Proteins in cluster: phalp2_36008
Total (incl. this protein): 56 Avg length: 145,6 Avg pI: 6,77
Protein ID Length (AA) pI
5BafP 130 6,07094
16u0o 135 6,72618
19Z1L 136 8,39825
1CeEN 141 4,59648
1E8rj 137 6,82252
1HBJh 184 9,38810
1eiks 141 6,28227
1kQYD 138 7,67772
2A6LS 173 9,11533
2DgnB 182 5,80993
2YiRy 140 4,89414
2YtYR 138 4,81554
2mFc9 151 5,03880
2wKh3 135 6,10106
30uRj 136 5,63504
35f0d 160 9,01540
35lPg 112 8,95087
36HCy 131 9,19708
3SAy8 137 6,90244
3g4I9 142 6,72754
3mU7x 139 6,14767
459Hy 140 7,83015
4Ik4Z 130 6,26351
4LWrv 142 6,82059
4Lw8K 152 9,69690
4Ng06 145 8,56574
4XBFl 136 4,63536
4cqQH 184 8,74090
4dNZW 142 5,49675
4dXTV 168 8,92695
4hRz0 133 6,28471
4hqYU 178 9,06143
4iVF5 154 6,95785
4iztK 138 6,95694
4jUZ7 142 5,29628
5F3xK 150 5,19192
5F4jO 151 4,92069
5JoXX 136 8,31560
5kK9V 159 5,72109
6FBL7 134 8,40676
6HWBt 150 6,28437
6IR18 128 7,63174
6wX72 140 5,68648
72kJW 186 9,37804
7G110 142 7,93111
7GaYK 169 5,10024
7SQFD 129 5,06085
875SN 148 5,37369
8f010 144 8,24501
8xa4m 129 5,06085
UG8P 131 5,55433
ZwAW 132 8,47774
dX9l 141 5,00919
geLC 132 5,84085
hjIT 141 4,78172
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_18469
6HUO8
 1331 38,8% 126 2.229E-45
2 phalp2_25649
4jN8F
 22 31,8% 132 1.082E-44
3 phalp2_3473
4dQaD
 481 39,0% 123 2.035E-44
4 phalp2_4391
2nbpE
 59 34,8% 129 1.128E-41
5 phalp2_35016
4T4sL
 1 39,6% 131 9.781E-37
6 phalp2_36030
5JouX
 4 33,3% 126 1.678E-35
7 phalp2_1814
3e6oo
 35 30,2% 139 1.915E-33
8 phalp2_34191
2Ld5M
 16 33,3% 129 1.273E-32
9 phalp2_24645
5Bc4f
 8 32,0% 125 6.174E-32
10 phalp2_22076
5Jkik
 65 33,5% 143 1.592E-31

Domains

Domains
Hydro_2
Representative sequence (used for alignment): 5BafP (130 AA)
Member sequence: 1rdoD (179 AA)
1 130 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF07486

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5BafP) rather than this protein.
PDB ID
5BafP
Method AlphaFoldv2
Resolution 94.30
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50