Protein

Protein accession
1rc3x [EnVhog]
Representative
1rfSx
Source
EnVhog (cluster: phalp2_36524)
Protein name
1rc3x
Lysin probability
80%
PhaLP type
endolysin
Probability: 95% (predicted by ML model)
Protein sequence
MKKYLFITLFIALSKTIPAGPCDTPILEVALQDKAPEKIPDEKLQESQTLPEGIIEIMKRHEEFSPEVIILDKPYIGYGHEVELGADRVTEEQADSLLRADIRINMNILATKNLRKFHKKLEHRYLILASVLAYNVGWVNVYKSKFLKKINEGYSDSEILEEFIGFHFWRGKPHVKLKRRRVEEAEAWLELY
Physico‐chemical
properties
protein length:192 AA
molecular weight:22395,7 Da
isoelectric point:6,61
hydropathy:-0,32
Representative Protein Details
Accession
1rfSx
Protein name
1rfSx
Sequence length
173 AA
Molecular weight
20404,53330 Da
Isoelectric point
8,70428
Sequence
MIKNITILSIFLLSLQAKTSESELIEYSIQEKQKKKEYSEELLKVMKSYETLSKKVIKSYDYNYIGYGHLITDSESFDSITDVQATELMLKDLKIQRYLFVGKVPEKYLEMLSVLAYNCRLNTILKSNFYKEIVNDGNFEKIKEGFLSFSVINKKEHKKLKQRRIDELEILFP
Other Proteins in cluster: phalp2_36524
Total (incl. this protein): 3 Avg length: 179,7 Avg pI: 8,12
Protein ID Length (AA) pI
1rfSx 173 8,70428
4kHVD 174 9,04138
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_13264
3cxGa
 4 30,5% 131 5.389E-23
2 phalp2_32792
2snIK
 45 27,6% 134 3.519E-12
3 phalp2_9083
5zGHj
 73 26,1% 130 1.209E-11
4 phalp2_39178
3afgT
 3 26,1% 180 7.674E-11
5 phalp2_19495
3emsO
 1 29,6% 152 1.420E-10
6 phalp2_126
5jCCA
 637 30,1% 136 2.625E-10
7 phalp2_5393
2zLq1
 3 23,6% 144 4.148E-09
8 phalp2_35413
eK0d
 13 30,3% 135 7.648E-09
9 phalp2_27392
4Hu3C
 1 31,0% 119 1.038E-08
10 phalp2_4451
31DIk
 4919 24,1% 141 2.596E-08

Domains

Domains
GH24
Representative sequence (used for alignment): 1rfSx (173 AA)
Member sequence: 1rc3x (192 AA)
1 173 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00959

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1rc3x
Method AlphaFoldv2
Resolution 80.12
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1rfSx) rather than this protein.
PDB ID
1rfSx
Method AlphaFoldv2
Resolution 90.73
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50