Protein

Protein accession
1rJba [EnVhog]
Representative
1HD6V
Source
EnVhog (cluster: phalp2_29474)
Protein name
1rJba
Lysin probability
99%
PhaLP type
endolysin
Probability: 97% (predicted by ML model)
Protein sequence
MQTSRRGQQFIKDGEGLRLVAYLCPAGVWTIGWGHTSDEKYPVKKGMKITKAQAEILFKHDVEEAEAAIRRHVKVQLNGNQYGALVSFIFNVGVEAFRKSSLLRMINKGAGAISITKAFSLWVKGGTPKRTIKGLVKRRADEAALYHTPDSLGDNPIKLPNTGKPTAQIEEGRNAKHDVSPSGVGTGKVGSGVASIGAGGAVEQIKDATDQLTYVADYSSVIQAVVVALVSLGAIIMLYGLYQRWKDQ
Physico‐chemical
properties
protein length:248 AA
molecular weight:26766,5 Da
isoelectric point:9,66
hydropathy:-0,18
Representative Protein Details
Accession
1HD6V
Protein name
1HD6V
Sequence length
248 AA
Molecular weight
26710,38120 Da
Isoelectric point
9,59813
Sequence
MKTSRRGQQFIIDHEGEKLTAYHDGVGVLTIGIGHTSDEKYPVKRGMKITRAQSREIFAHDMSEVERAISAMVVPQLNGNQYGAVASLILNIGVEGFRGSTVRKLINKGGSKSAITRAFGMWVKGGNPKREIAGLVKRRADEAALYFTPAELGKSPVVLPKTGKPTPQIEEARGTKGNVAEGGDGTLAVQTGTGITGTGAVADVVRDQADQLSFVAYYSDIIQYVVIAMVMLGVSITFYGLYKKFKDK
Other Proteins in cluster: phalp2_29474
Total (incl. this protein): 2 Avg length: 248,0 Avg pI: 9,63
Protein ID Length (AA) pI
1HD6V 248 9,59813
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_26378
1q5mp
 207 38,7% 253 3.649E-40
2 phalp2_30676
6Q25R
 25 42,5% 167 3.482E-37
3 phalp2_2498
5GMvl
 297 32,6% 248 4.754E-37
4 phalp2_33221
5jbqV
 447 42,9% 149 2.120E-33
5 phalp2_10966
4MkR6
 70 39,8% 168 1.003E-32
6 phalp2_19992
6T980
 5 31,2% 253 3.051E-31
7 phalp2_2632
6RhYr
 14867 39,8% 158 5.675E-31
8 phalp2_29738
1pBjt
 830 38,6% 163 2.342E-29
9 phalp2_34878
4dXDH
 390 41,0% 151 5.175E-28
10 phalp2_16226
4N0ln
 10 28,9% 252 2.428E-27

Domains

Domains
GH24
Disordered region
Representative sequence (used for alignment): 1HD6V (248 AA)
Member sequence: 1rJba (248 AA)
1 248 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00959

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1rJba
Method AlphaFoldv2
Resolution 75.92
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1HD6V) rather than this protein.
PDB ID
1HD6V
Method AlphaFoldv2
Resolution 77.24
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50