Protein

Protein accession
3VMqM [EnVhog]
Representative
3VMqM (this protein)
Source
EnVhog (cluster: phalp2_1872)
Protein name
3VMqM
Lysin probability
99%
PhaLP type
endolysin
Probability: 95% (predicted by ML model)
Protein sequence
MSNATAISVMRYALQQYHYTESPAGSNKTKFGRDYGADGQPWCSYFVWDSGAHGDGDNPIAKANNAGDIQDWTVSKKGGSWVMPKTKSNKTKAEGMKRAKFGDIASFDFGENDMWRDHTALYIGDGYLIEGNTSFDDKGSQDNGGAVALKLRPSNYICSYARPKYKQKDFYKPTTPYTGPALKLPEDGSFKWGDKGAKALQEALKWSNGYKLDPDGDFGSKTFAEVVIFQVANGLTPDGVFGKKSLDKMNALIEKNAKKDDTDAETKPAETTPAEPKHPALFIPTQGGQCYDLSNHQGVLSVDYFKSLKKKGVTCVILRSSYTRLAKFEMHEDAAFKQNIKNAHAAGLHVGIYHYSSAVNVTEAKKEAKFCLKIIKPFVEYIDLPVAFDCEFGTRFTRATAKSLGRSGMGKIADGFLGEIKAAGYEPMLYANLDMLNNYMPTDIYKKYKIWIAQYNSKCQYKYPYYMWQYTSTNGKLDKNKFGTQDTKKKETSTTTETKVAYPGELPSLKLVKTTEEVIKDDIKWLRWIVKDNDFHYGYTNKHGSSDSKKWSPNAHHNGCYFCRTNGKNKAGIVDKEHSYCCNPLIHAGWAHGGCIPKALEICQDGSSWDFNKGHGYDKSSLFDNLGHPDKKKLKPGDVLCNDNHVAEYIGNGVIAEASGGDDNKKGSKKWNNSIRIVELTDKRYASFKRVHRFNGKVNTTCNILHGEVGKRVEKLQSFLKWYGYKVEDDGLFGDATLKYVKAFQKTAGLTVDGVVGQKTIDAMKAARRAA
Physico‐chemical
properties
protein length:771 AA
molecular weight:85998,2 Da
isoelectric point:9,09
hydropathy:-0,67
Other Proteins in cluster: phalp2_1872
Total (incl. this protein): 12 Avg length: 813,7 Avg pI: 9,27
Protein ID Length (AA) pI
21rJJ 802 9,37050
233yE 852 9,66840
3TFud 678 9,25826
3fSpA 1014 9,19385
3ifkY 802 9,34510
3nDpy 1058 9,17406
3nIM1 1075 9,35361
80CVi 698 9,26322
89Iaj 698 9,24362
8ipWM 698 9,21996
8ivaP 618 9,07839
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_40016
21xMj
 21 28,0% 503 1.129E-78
2 phalp2_36610
23eLB
 12 26,2% 564 1.797E-65
3 phalp2_4916
6k3vw
 208 24,7% 517 2.168E-46
4 phalp2_40067
41dSE
 5 27,5% 490 1.097E-35
5 phalp2_2377
7JCYq
 91 23,9% 492 2.994E-33
6 phalp2_16855
1Jgdv
 1 23,1% 506 1.138E-31
7 phalp2_34377
4dm6y
 15 22,1% 560 1.313E-29
8 phalp2_32938
3TLgl
 6 22,5% 505 2.294E-29
9 phalp2_3229
2bNef
 21 22,8% 534 7.482E-16

Domains

Domains
PG_1
GH25
Unannotated
PG_1
Protein sequence: 3VMqM
1 771
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183, PF01471

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3VMqM
Method AlphaFoldv2
Resolution 72.58
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50