Protein

Protein accession
3VDPY [EnVhog]
Representative
3VDPY (this protein)
Source
EnVhog (cluster: phalp2_21764)
Protein name
3VDPY
Lysin probability
99%
PhaLP type
endolysin
Probability: 94% (predicted by ML model)
Protein sequence
MMSNSPLVNYTKISPNKNSPRSHKIDTITIHCVVGQLSVESLGAIFAQTSKKASSNYGIGSDGRIGLYVEEKDRSWCSSNADNDNRAITIECASDKTSPYAVNDKVMNSLIKLLVDICRRNGIKELKWKADKSLIGQVDKQNMTVHRWFAAKSCPGDYLYSRHGEIASNVNKILRGNEHVYTANTKLTPEKFISTIAPIVMKYHDKYKFGFPSIIIAQACLESGYGTSNKVINPMTGAYRHNYFGLKYRPGRVFVNNGYFTESGSEQNADGSYTPGKFDWYKFPSMDAGVEGYFQFIKNGLYKNAVLAKTPEEYIVELKKAGYASSLDYVSKITNVVNVRELTKYDDKKPLTYTEPKGTYWVGYLVADLKIGTKGKIVKFAQKLLNGAGLKVQEDALYGEKTAKAVSDFQSKNSLAVTGEIDAKTWLKLTASNGIHI
Physico‐chemical
properties
protein length:437 AA
molecular weight:48617,8 Da
isoelectric point:9,30
hydropathy:-0,41
Other Proteins in cluster: phalp2_21764
Total (incl. this protein): 2 Avg length: 461,5 Avg pI: 7,99
Protein ID Length (AA) pI
76oH9 486 6,67684
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_5251
813lL
 211 32,5% 486 3.848E-102
2 phalp2_25651
4k5ro
 34 42,0% 335 4.688E-101
3 phalp2_30077
2WEC1
 850 43,6% 435 4.491E-90
4 phalp2_5916
5W5a2
 62 36,0% 372 7.738E-63

Domains

Domains
Ami2
GLUCO
PG_1
Protein sequence: 3VDPY
1 437
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471, PF01510, PF01832

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3VDPY
Method AlphaFoldv2
Resolution 88.27
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50