Protein

Protein accession
3TDb1 [EnVhog]
Representative
3TDb1 (this protein)
Source
EnVhog (cluster: phalp2_5557)
Protein name
3TDb1
Lysin probability
99%
PhaLP type
endolysin
Probability: 83% (predicted by ML model)
Protein sequence
MNLDTFISVFKDKAVDFDYISGVQCVDTAKMYFYYVLGIKPQIIGNANEYADRYYELPYLYENFEYIPYNFPFTPEKGDVAVWNTTFGKYGHIAICTGEGDWNKFCFYEQNGDVKELVKRCSDYFGVEGFLRPRNKKLI
Physico‐chemical
properties
protein length:139 AA
molecular weight:16318,3 Da
isoelectric point:4,99
hydropathy:-0,33
Other Proteins in cluster: phalp2_5557
Total (incl. this protein): 10 Avg length: 142,3 Avg pI: 7,54
Protein ID Length (AA) pI
1AFWg 147 9,08458
1zlOG 138 8,83225
3daGB 150 5,72280
4b1xw 119 5,24683
6xh5p 147 9,33594
7W5Po 175 7,75434
7XHWh 138 8,36679
7Xek1 135 9,09792
8b5TA 135 6,94870
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_39580
6iLgH
 177 43,6% 142 9.311E-39
2 phalp2_30026
2tAM9
 32 36,9% 138 8.002E-34
3 phalp2_10799
3WA57
 47 37,3% 142 2.921E-30
4 phalp2_24452
4BMZo
 66 32,4% 145 1.414E-29
5 phalp2_3543
4zM0o
 163 37,0% 143 6.843E-29
6 phalp2_17703
71dZW
 23 30,4% 141 1.169E-27
7 phalp2_37199
1X3cR
 12 41,4% 135 2.196E-27
8 phalp2_15913
4FuWg
 22 28,8% 149 3.748E-26
9 phalp2_19980
6QODi
 3 30,2% 139 3.539E-19
10 phalp2_11577
18WTO
 29 28,0% 146 3.561E-16

Domains

Domains
CHAP
Protein sequence: 3TDb1
1 139
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF05257

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3TDb1
Method AlphaFoldv2
Resolution 97.25
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50