Protein

Protein accession
1pDFe [EnVhog]
Representative
8aXzb
Source
EnVhog (cluster: phalp2_16996)
Protein name
1pDFe
Lysin probability
97%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VSVRERFVNVALGEVGKAYEAHRDCSGFVAWAVRQVGITIPEGSVAQFGVGQRTFDYADEPGLLHFWATYGEDPGHVGIGIGGGKVVHAMNESVGITISSLRANMGGKNRYMGARRFIMEGAPDPEEPTGKPPKGSGPEGGEPGSTPGPSTRPTRDRERRERREDRRKSRGGRRGRR
Physico‐chemical
properties
protein length:177 AA
molecular weight:19186,2 Da
isoelectric point:9,98
hydropathy:-0,79
Representative Protein Details
Accession
8aXzb
Protein name
8aXzb
Sequence length
152 AA
Molecular weight
16969,89830 Da
Isoelectric point
7,02328
Sequence
MSQREDLVRIALGEVGKSYSAHRDCSGYTAWAYRQIGITIPEGSVAQYWAGKPTRGPMPEPGDLLFFDTFGPAPGHVAMWVGDGHKIVHALNEERGIVVSDEFDHMGGNNIYMGGRSFLPADSPIEDNPDPVEESPKVKRPRRKHRRRKDRA
Other Proteins in cluster: phalp2_16996
Total (incl. this protein): 3 Avg length: 173,0 Avg pI: 8,58
Protein ID Length (AA) pI
8aXzb 152 7,02328
8jiw1 190 8,73555
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_31281
8oyW0
 1 39,5% 162 1.309E-26
2 phalp2_16267
7ML59
 15 33,3% 120 1.179E-16
3 phalp2_2843
8JxjE
 191 27,6% 123 7.422E-13
4 phalp2_13021
4419T
 1 28,8% 135 2.733E-10
5 phalp2_40507
4EDHv
 24 30,6% 111 2.836E-08
6 phalp2_18098
45XNx
 2 32,5% 129 2.836E-08
7 phalp2_23010
3Pu9w
 1 25,8% 139 2.836E-08
8 phalp2_30337
4DjMH
 5 28,2% 99 7.153E-08
9 phalp2_5496
3gZKB
 21 28,8% 156 9.735E-08
10 phalp2_5892
5HKSo
 183 27,1% 114 1.802E-07

Domains

Domains
NLPC_P60
Disordered region
Representative sequence (used for alignment): 8aXzb (152 AA)
Member sequence: 1pDFe (177 AA)
1 152 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00877

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1pDFe
Method AlphaFoldv2
Resolution 74.46
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (8aXzb) rather than this protein.
PDB ID
8aXzb
Method AlphaFoldv2
Resolution 79.37
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50