Protein

Protein accession
1pD00 [EnVhog]
Representative
1rrkY
Source
EnVhog (cluster: phalp2_20042)
Protein name
1pD00
Lysin probability
77%
PhaLP type
VAL
Probability: 98% (predicted by ML model)
Protein sequence
MGNRQAASAGKPVTFDGQAEITRKLPELPVDHGMEFAALGKLFDTVGSEIGAMADHAAKVEGAAAGVAEGRQAFAEMRPLALRRDGTIRGDATDRAATSTAEWRALSTFHEGLRQAHEQAQGDPAVFDAAVGKLATSVKTVAGSDPVFGDMLDAKMAAAAEPYRRALSAQRAGRIEEERRSAADEAMAATEQDLARKAYLAGSDPASSKALETDVSHARAAVSAAEAEGVIPPAEAARRRKSLGDQVVEARLRGVFDALPDAASKTAWVDGLEKRWAEGDPALGALDRSRVEGLMTHMRGAARADTADQRLRSALDRKVLEHGLADDVASIRASGQPAAGADQRDDGRVAALLGPVDAAKWADERRAAQDWWSQAGDLGRLSGEEIAARVTSLEPIPGAADYARKARLHDEAKKEADRILKMRATDPARAVDDAVKGVREAKAALDPGRPDTFERWVSMRMSAQAALGIPEAAQQPLTDAEARAIMAPVTKAAPGQEWTAFQSVAADVAKRYGSRSEAVTRQLLQVHGVDKDTARAGSLFMDRMQRGEATPADAARVDVATQTSAADRAMAPTPPPTIARPIPGRAIEMLKARPDLAGAFDEKYGAGLSKLYLEDKSAGQGGTP
Physico‐chemical
properties
protein length:624 AA
molecular weight:65926,1 Da
isoelectric point:5,80
hydropathy:-0,43
Representative Protein Details
Accession
1rrkY
Protein name
1rrkY
Sequence length
673 AA
Molecular weight
70796,21170 Da
Isoelectric point
5,21432
Sequence
MARRARSAGDLAQFQGTGQVAGDLPRMPVDDGSDWTKVASVFAGLSNQLGSLADAAALREGQAEGLEKGMKASLPNAGGEPVPLALRRDGTISGEASDKAAIATFAQRLDIGLRSEIAAAHDSLKGDPAALIGRLNEIQATYDADINAGSDPRLRAALQMRFEQATATYKLDAAWQRERALIQERNTTTRTALAGQRQDIERQAYILGANPAGDKLLAQQVEQGDREVDAAAAEGVITPAEQVEEKARRRTAALTAKVRGAFDAIEDPAAQERFAAKLSEDWENKKGAISVLDKDTADTLAGELMTTARRRQAERQAETGISRADLARKLDQDVANLRATGQPMAFDGGPLQPADVARVLGADRAAEWAVARNQARKVYAATADFGSMSAEAIAGRLAGLDDGRNPELAAEVRAEAERVLDARRRDPAGAVDGAFNQVQAAKLALNPENPATYQALADARVNAQEAVGVPDLARQPLTEAEARALVGPVLAAAPDQRVKVLQGVLTDVERRYGPHADAVTAQLLHQAGVDSGSATASAGLLRRIGAGGRPSAADARAVDVATETRMAEQAFLVGRLGSDPVLDSVDPAPQAGAIAAPQTQSPGAAPAKPKALPPPRPSSRALEMLRQRPDLAPKFDEMFGAGQAEYYRGIMSNVPAAAGRTTINPDGSENWEP
Other Proteins in cluster: phalp2_20042
Total (incl. this protein): 3 Avg length: 712,3 Avg pI: 5,57
Protein ID Length (AA) pI
1rrkY 673 5,21432
4Krih 840 5,70194
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_23335
5upmU
 3 32,4% 620 4.820E-85
2 phalp2_33461
7gSyy
 6 28,1% 580 3.419E-76
3 phalp2_3914
6W2U1
 11 33,1% 594 4.172E-69
4 phalp2_17488
5jjCJ
 64 26,4% 560 1.803E-15

Domains

Domains

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (1rrkY) rather than this protein.
PDB ID
1rrkY
Method AlphaFoldv2
Resolution 78.92
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50