Protein

Protein accession
3MMD6 [EnVhog]
Representative
3MMD6 (this protein)
Source
EnVhog (cluster: phalp2_23989)
Protein name
3MMD6
Lysin probability
99%
PhaLP type
endolysin
Probability: 63% (predicted by ML model)
Protein sequence
MAKDNIAPPKKPVTQPMSSGFKSFLIVMITIYAILGIGGIYVHYKWDIIKEKYLTETVEVEKPVEVVKWVEHIKMPTHLMIENLKPSLDPAVAEKIGLAVEKYSKEYQLPKKLILSIIFHESSFDIFAKSKAGAVGLMQVLPKFHQDKIDAIGVKDNRKLYHIDNNINLGCKIWKVYYDASKKDIDETFHSYLSKNATQEQKNKYKNKILETWARLEFLEFQYTNGYGKQHKERH
Physico‐chemical
properties
protein length:235 AA
molecular weight:27262,5 Da
isoelectric point:9,21
hydropathy:-0,39
Other Proteins in cluster: phalp2_23989
Total (incl. this protein): 17 Avg length: 242,3 Avg pI: 8,42
Protein ID Length (AA) pI
10Z20 266 9,17064
1Cly2 248 6,12448
1ozVi 270 8,89517
2egyQ 200 7,64174
2fRz0 257 9,40602
36sAC 251 6,35309
3QLdK 243 8,55317
3RSoW 243 8,26789
3i9lc 255 6,21451
4JQFQ 235 9,56951
4Wrl3 277 7,71131
4hSXI 247 9,46436
4iZoM 252 9,19572
5dT34 223 9,38004
XBTo 214 9,14118
eWc2 203 8,91225
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_11964
2UWwJ
 5 26,0% 188 1.484E-24
2 phalp2_40602
7G5r5
 1 26,6% 225 6.106E-21
3 phalp2_15642
2LPTY
 8 28,4% 158 5.954E-17
4 phalp2_25221
2aelP
 7 31,2% 144 2.730E-16
5 phalp2_21370
238mK
 3 23,8% 159 2.589E-14
6 phalp2_12998
3nWhM
 100 26,0% 169 4.780E-11
7 phalp2_16612
fmS0
 3 25,8% 151 2.127E-10

Domains

Domains
SLT
Protein sequence: 3MMD6
1 235
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01464

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3MMD6
Method AlphaFoldv2
Resolution 77.88
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50