Protein

Protein accession
3MDMr [EnVhog]
Representative
3MDMr (this protein)
Source
EnVhog (cluster: phalp2_5192)
Protein name
3MDMr
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VAILWPNGRTTPPPISSGFGPRGSGAYGDASTWHLGTDFYGYDTIHAIADGTVVYVGWNSGVGWSSVAGYMVWVQHDGFFSRSLHTAAATARVSVGDQVRAGDPLIDMGYSGLFDGAGNPAPWRKHHHLEITPGQWHAGNTGQVNPYTWLAEHVGGSATGAGGGGTEISNDTNQSEEDDMRYLKLKDNGRLYQVGPEFINGVDGADGENKAWADAGLPGYTEVARWSFDRILRHHAIPENVVNAAGDVLDDLTGGTRYVRHGSWSRAQKVERLAYVAGK
Physico‐chemical
properties
protein length:279 AA
molecular weight:29922,5 Da
isoelectric point:5,68
hydropathy:-0,43
Other Proteins in cluster: phalp2_5192
Total (incl. this protein): 4 Avg length: 263,5 Avg pI: 5,83
Protein ID Length (AA) pI
5ipsq 220 5,36392
7hFju 274 6,29511
7xiZf 281 5,98341
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_1551
3MFaL
 4 68,7% 189 1.973E-81
2 phalp2_25231
3ObmF
 1 37,1% 191 1.034E-32
3 phalp2_8242
7xj4I
 2 23,4% 307 2.230E-23
4 phalp2_6940
2RX5W
 1 30,4% 220 2.136E-21
5 phalp2_36887
7ub2Y
 40 30,8% 178 1.317E-20
6 phalp2_13843
7k2Ej
 3 31,0% 187 1.007E-17
7 phalp2_26649
2g35l
 5 27,1% 236 3.348E-17
8 phalp2_17370
4GXf7
 2 25,2% 226 9.017E-16
9 phalp2_22360
8MADT
 6 27,9% 258 1.508E-12
10 phalp2_39908
1iVNq
 39 23,4% 196 9.747E-09

Domains

Domains
Unannotated
Unannotated
Protein sequence: 3MDMr
1 279
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3MDMr
Method AlphaFoldv2
Resolution 63.61
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50