Protein

Protein accession
3LHQD [EnVhog]
Representative
3LHQD (this protein)
Source
EnVhog (cluster: phalp2_811)
Protein name
3LHQD
Lysin probability
97%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSVRDISWRGEHLLPHPLRTTGPTSAKRYTVLPPTNVNAISVHHTTGIGLPASSTVAQEITYLRAIDAYHRLRRGLDAIGYQLVAFASGRVYVTAPLDRYGAAVGGQNNHTISVALPGDFSTKPPSPGHLRAAATAVAHVDAYLGRKVAVRPHYYWGRTACPGRTYATWAAQLRPFATRYHTVVHGDTAWGIAVARRISLARLKALNPSGPRSGDWDLIYPGERLRVA
Physico‐chemical
properties
protein length:228 AA
molecular weight:24817,0 Da
isoelectric point:10,52
hydropathy:-0,20
Other Proteins in cluster: phalp2_811
Total (incl. this protein): 14 Avg length: 257,2 Avg pI: 7,48
Protein ID Length (AA) pI
2Afar 287 9,90520
2Aq6S 277 8,77713
2Ce1u 267 5,96738
2D1Mj 234 9,75228
2DiFI 267 5,56104
2Diht 262 8,77822
2zJND 267 5,86450
5EYlq 242 6,19712
5IYNE 242 6,35934
7VE4 273 7,39739
8TOo 256 6,99116
faNK 250 6,25663
faaS 249 6,34871
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_38381
PVnb
 6 31,2% 176 5.519E-31
2 phalp2_25143
1DOXL
 10 33,1% 154 2.618E-30
3 phalp2_39380
4H4oF
 116 35,7% 140 4.878E-30
4 phalp2_33542
d7AS
 1 24,5% 220 2.145E-26
5 phalp2_20475
3QykQ
 6 29,5% 166 1.378E-25
6 phalp2_17367
4Fh2P
 1 31,2% 160 6.486E-25
7 phalp2_2157
3Plvk
 4 30,6% 147 9.142E-23
8 phalp2_36193
72BPm
 409 30,2% 182 1.733E-18
9 phalp2_39705
c0fQ
 7 25,8% 151 3.703E-17
10 phalp2_11810
8amSp
 5 29,8% 164 1.063E-15

Domains

Domains
Ami2
LysM
Protein sequence: 3LHQD
1 228
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01476, PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3LHQD
Method AlphaFoldv2
Resolution 93.46
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50