Protein

Protein accession
1lmPF [EnVhog]
Representative
6U8BM
Source
EnVhog (cluster: phalp2_32186)
Protein name
1lmPF
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VTTFVILEPEEWGMRWERPPLPEKLLDPEVFVHHRAGNPHHDRDAAEVFREMNEGAISGKHYSATDYDVLVHENTITDTVTIGVARGVWLSAATKDRNEQGEAICALGYFHPGSKLSEHPSPGMVEGVARGIALMIRRGWAAPDAVILGHRQNPAHVAETSCPGDYLFAEMDTIRRRVAELLAPVVEQHPPVKDSDMNTPFIRFDGYADQFIAIPVTQDSKARLDPSDVQRRPIVVKTDLDRAELEAKVGYQLTPGI
Physico‐chemical
properties
protein length:257 AA
molecular weight:28584,9 Da
isoelectric point:5,36
hydropathy:-0,37
Representative Protein Details
Accession
6U8BM
Protein name
6U8BM
Sequence length
264 AA
Molecular weight
28850,15550 Da
Isoelectric point
5,46288
Sequence
MTTFTYKRSDEWGIRWARPPIAEKLLDPECYVHHSAGAHVNDAATAFRNLNEYAITQKGYSALDYDILVHRNKITGEVTIGEGRGKWMSAATADRNEQGEAVCVLGYFHPGHTLSRQPHPDELEGVALGIQWGMVEGWISPTATILGHRENPAHPGATGCPGDYLFAHMPTIKARVAELQKPPVVVVPPQPPKDDDDMTTAVIWGPEGYANRFLIGAGDVIHLSPKLNAHYKSLGVPEVTGDDHDLTLETVLYASGLNTSDLVL
Other Proteins in cluster: phalp2_32186
Total (incl. this protein): 8 Avg length: 268,3 Avg pI: 6,21
Protein ID Length (AA) pI
6U8BM 264 5,46288
2GtNB 282 5,90054
2Txbj 250 6,50513
4UlXy 296 7,77729
7ZTLY 272 6,63092
8j6G 267 6,24401
8rg08 258 5,79095
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_11583
1bp36
 1 50,5% 176 5.152E-63
2 phalp2_23216
7DAyW
 82 31,1% 202 4.514E-26
3 phalp2_11279
6RMLU
 4 32,4% 191 1.135E-25
4 phalp2_3598
4JlBw
 7 27,2% 176 2.772E-16
5 phalp2_38135
6RJt9
 7 25,5% 176 5.060E-16
6 phalp2_13210
2JwXt
 44 24,7% 206 1.683E-15
7 phalp2_30119
3eark
 30 27,7% 184 2.015E-13
8 phalp2_39895
1eEek
 97 28,2% 205 1.615E-12
9 phalp2_15057
7s7pP
 172 27,4% 237 2.321E-11
10 phalp2_36432
11r0n
 207 25,2% 218 2.321E-11

Domains

Domains
Unannotated
Representative sequence (used for alignment): 6U8BM (264 AA)
Member sequence: 1lmPF (257 AA)
1 264 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (6U8BM) rather than this protein.
PDB ID
6U8BM
Method AlphaFoldv2
Resolution 81.30
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50