Protein

Protein accession
1lbmk [EnVhog]
Representative
2yClh
Source
EnVhog (cluster: phalp2_5390)
Protein name
1lbmk
Lysin probability
99%
PhaLP type
endolysin
Probability: 96% (predicted by ML model)
Protein sequence
MILAQDSKGTAVEAIQAALNLGGTKLRVDGDFGAKTKVAVLQMQRVTKAKVTGTVTVRDEPELVARSVVVPVGSLEPVDIFMSKFPVQHLTQRNNEKKPSGTCNVTSTAMGLIWLLGIPAVTNGVQLEDALYDEINGPEALAYMKKNFSWAVDQKIPPQQVLGMLEWLLKRHGAFQAKFTTEATKDTILKALDTAPVILSGAFTKSGHIVLAIGKTKAGDLIVNDPWGDWTTGYTNTNGASRVYPNETIWKCLDKGKGKCWAITIGAAIPKVSLSFFYKGLNG
Physico‐chemical
properties
protein length:283 AA
molecular weight:30546,0 Da
isoelectric point:9,21
hydropathy:-0,03
Representative Protein Details
Accession
2yClh
Protein name
2yClh
Sequence length
264 AA
Molecular weight
30084,14470 Da
Isoelectric point
9,50208
Sequence
MNTIHRGLRGKNVLGLKSLLKEAGLIVTHNNIFDLQTEAGVRTAQEKLGLEKDGIVGPKTWSELLAKPRLFNKPTDPIEWVKVTPYYPQRDNEYHPGGTCNVTSLAMVLAYHGVIPTKANQLEDELFIRLQKTDAIDEFNKNYPSLKKMGYKPRHIHGMLGWLARQYGFSWKYSEKTSRSDLIDFGKTTGPMIISGRFTSSGHIVTLVGMTLFNDLIVHDPWGDWNSNYRKRDGKYKIYNREAMEDVLSGHSKELKRAHRITPA
Other Proteins in cluster: phalp2_5390
Total (incl. this protein): 4 Avg length: 270,0 Avg pI: 8,53
Protein ID Length (AA) pI
2yClh 264 9,50208
54Zgw 265 9,19153
8eeNO 268 6,21565
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_34142
2jEnG
 37 28,3% 212 5.735E-32
2 phalp2_34437
4wMwB
 66 30,4% 197 1.497E-29
3 phalp2_1376
1gp6M
 3 30,9% 181 5.241E-27
4 phalp2_16156
4uGeP
 55 35,5% 166 3.319E-26
5 phalp2_84
4WuCJ
 39 33,7% 181 2.085E-23
6 phalp2_11155
5BBbB
 16 21,9% 228 3.290E-10

Domains

Domains
PG_1
Representative sequence (used for alignment): 2yClh (264 AA)
Member sequence: 1lbmk (283 AA)
1 264 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF13529|PF01471

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (2yClh) rather than this protein.
PDB ID
2yClh
Method AlphaFoldv2
Resolution 96.28
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50