Protein

Protein accession
1lKyj [EnVhog]
Representative
2Ud3d
Source
EnVhog (cluster: phalp2_40269)
Protein name
1lKyj
Lysin probability
99%
PhaLP type
endolysin
Probability: 74% (predicted by ML model)
Protein sequence
MTDAAYDAFRNRLESGGDDNAYNPRSGALGKHQFLESTWLGLVKRHQPAWAQGLTAAQILDRRRDGAISDRMVALYDQDSAQQLASAGYAATPGNLYLAHHFGATGARKILAAPDDTPIRSLVSARAYRDNPHLHGKTKAQVLAAFARRGGAPAAFGSTSVPTDVSVPERMAAYAPFRPVVDASIPVAPPTPVWRPAVAPAPSLRVPSSPPPSAAYVLPGPAPRPEASAPTTPAFDPTAPMPDPTNAAPDEPTPLETLLRMLR
Physico‐chemical
properties
protein length:263 AA
molecular weight:27833,1 Da
isoelectric point:9,25
hydropathy:-0,34
Representative Protein Details
Accession
2Ud3d
Protein name
2Ud3d
Sequence length
263 AA
Molecular weight
27749,74030 Da
Isoelectric point
8,03033
Sequence
MTDDAYDAFRNRLESGGDDNAYNPRSGALGKHQFLESTWLGLVKRHQPAWAHGLTAAQILDKRRDGAISDRMVALYDQDSAQQLASAGYAATPGNLYLAHHFGATGARKILAAPDDTPMRSLVSARAYRDNPHLHGKTKAQVLAAFARRGGAPAAFGSTSASTDVSAPERMAAYAPFRPVVDASAPAATPTPVWRPDVAPASSLRAPSSPPPSAAYVLPGPAPRPEASAPTTPAFDPTAPMPDPTNAAPDEPTPLETLLRMLR
Other Proteins in cluster: phalp2_40269
Total (incl. this protein): 9 Avg length: 251,3 Avg pI: 9,38
Protein ID Length (AA) pI
2Ud3d 263 8,03033
2Ud8i 263 9,42703
4KtKM 247 9,33839
4LLfT 244 9,29339
5CTRK 251 9,42903
5IKKn 208 10,23038
cL5J 263 9,85633
cLgO 260 9,55288
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_10254
169Nz
 76 32,5% 252 1.227E-30
2 phalp2_27783
7rv9k
 5 36,8% 187 9.432E-27
3 phalp2_9580
1ohvB
 2 32,5% 178 2.166E-18
4 phalp2_9031
5dbWm
 4 23,5% 178 1.266E-11
5 phalp2_23724
L6pS
 5 27,8% 176 1.408E-09

Domains

Domains
Unannotated
Disordered region
Representative sequence (used for alignment): 2Ud3d (263 AA)
Member sequence: 1lKyj (263 AA)
1 263 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (2Ud3d) rather than this protein.
PDB ID
2Ud3d
Method AlphaFoldv2
Resolution 71.00
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50