Protein

Protein accession
1kvDD [EnVhog]
Representative
41rm5
Source
EnVhog (cluster: phalp2_22687)
Protein name
1kvDD
Lysin probability
99%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MTKTNSGLIEYARAQLGKPYWWGTFGQTGSASLHAAKKRQYPSYYTASDFPRQYGQRVHDCIGLIKGYLWSDSPTAAPRYNAAQDKSASGMYAASKVKGRIGTFDYVPGRLLYKGSSPERINHVGVYEGGGYVIEAKGHAYGVVRTEFRPAEWTYWSQCPFIQADLSEGSAGDFAAHKKGTMNLVDMSDVQWKNGLRDIVAFARSNNIDGVIIKCSRGASSVNDSFEPWADALTAAGIPWMAYHFLNNDSKAAGAVKEADYFYDQVEPYLGTCALALDYENKDMGFAVGPKYAKAFLDRVKERTGVTPLIYTQQSMVHTLGEICKAGYPLWVAAYASEREYTAFEPDQTCSGISPYKEAAIFQYTSNMHLKGYSGDLDADVFYGTAEDWKKLTGESEVRVMVSVSAELPELRKGCTGRAVRVMQTILLSEGFTLSTDGVFGAHTDTCVREWQSVHKLAADGIVGAKTWRAMLEVL
Physico‐chemical
properties
protein length:475 AA
molecular weight:52383,4 Da
isoelectric point:6,57
hydropathy:-0,31
Representative Protein Details
Accession
41rm5
Protein name
41rm5
Sequence length
472 AA
Molecular weight
51872,00510 Da
Isoelectric point
8,86281
Sequence
MSKTNSGLIAYALAQLGKPYWWGTFGQTATASLHSAKKRQYPSYYTASDFPKQYGQRVHDCIGLIKGYLWSDTPTSVPTYVGAQDKSASGMYSVSTIKGRIGTFDFVPGRLLYKGSSPSKINHVGVYIGNGWIVEAKGHAYGVVKTAFKGSEWTYWSQCPYIQADTKKDSGTGQETAGTASKTMNGIDISDVQWKNGLRDIVAFVKANNIDFVIIKCTRGEGTVNESFKPWADALTAADIPWGAYHFLNNNSTEPGASVEFDNFMKYFAPYVGKAAIFLDYENADMGFAVGEGYAKEWLDKVKEATGVTPIIYTQQSRVSKLGAIHAAGYPLWVARYGKNQKITQFNPNQTCEGIAPYSEALIFQYSSNLYLTGYGGKLDCNVFYGSADDWKKLCEVKKERSMISIYGQVPRLRRGDKGTAVKVWQSIIGVEVDGSFGPATEQATKDFQTKHGLTADGIVGTKTWPEGLMVL
Other Proteins in cluster: phalp2_22687
Total (incl. this protein): 3 Avg length: 488,0 Avg pI: 8,19
Protein ID Length (AA) pI
41rm5 472 8,86281
3WEi0 517 9,13770
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_36067
6rv4w
 74 31,8% 305 3.172E-33
2 phalp2_39458
4VDTp
 155 27,6% 326 1.331E-20
3 phalp2_3439
3WDPn
 5 27,6% 311 1.269E-18

Domains

Domains
Unannotated
GH25
PG_1
Representative sequence (used for alignment): 41rm5 (472 AA)
Member sequence: 1kvDD (475 AA)
1 472 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183, PF01471

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1kvDD
Method AlphaFoldv2
Resolution 88.86
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (41rm5) rather than this protein.
PDB ID
41rm5
Method AlphaFoldv2
Resolution 87.86
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50