Protein

Protein accession
1kd45 [EnVhog]
Representative
6pd1n
Source
EnVhog (cluster: phalp2_33314)
Protein name
1kd45
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MNITNAGVRGYNPTGVVIHNDAGSNGANAGFYNNWLPNHNPENGFAHVYIGNDGRLQASDFSNMAWHCANSYGN
Physico‐chemical
properties
protein length:74 AA
molecular weight:7968,5 Da
isoelectric point:5,97
hydropathy:-0,61
Representative Protein Details
Accession
6pd1n
Protein name
6pd1n
Sequence length
88 AA
Molecular weight
9513,02600 Da
Isoelectric point
5,25354
Sequence
MNITNAGVRGHNPTGVVIHNDAGSNGANTGFYNNWLPNHNPENGFAHVYIGNDGRLQASDFSNMAWHCANSYGNANYASWEVCQSEGD
Other Proteins in cluster: phalp2_33314
Total (incl. this protein): 5 Avg length: 87,8 Avg pI: 5,78
Protein ID Length (AA) pI
6pd1n 88 5,25354
1o4Vu 68 5,97198
6sMwF 93 6,44397
8ssoy 116 5,25575
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_23792
1bLDz
 6 60,3% 58 1.583E-16
2 phalp2_8333
8JaN1
 18 38,0% 84 2.148E-08
3 phalp2_30401
4NIg7
 17 26,5% 79 5.509E-04

Domains

Domains
Ami2
Representative sequence (used for alignment): 6pd1n (88 AA)
Member sequence: 1kd45 (74 AA)
1 88 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (6pd1n) rather than this protein.
PDB ID
6pd1n
Method AlphaFoldv2
Resolution 96.60
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50