Protein

Protein accession
1jcmk [EnVhog]
Representative
6XRhH
Source
EnVhog (cluster: phalp2_10005)
Protein name
1jcmk
Lysin probability
79%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MRAKAALISTFIISSISLIAFAVWPVSVAADQQHAIQPTSTISSSAAWHFGHALPDPIPEPISNVASPPTTTSSAPAVVAPTPIVQSTEVTDADRVAWSKVAVCETGGNWQMTGSSFSGGLGFANSSWLAYGGAEFAPNAGLATMDQQIIVAKRIQSNPPDQNGCSGGW
Physico‐chemical
properties
protein length:169 AA
molecular weight:17437,4 Da
isoelectric point:5,07
hydropathy:0,13
Representative Protein Details
Accession
6XRhH
Protein name
6XRhH
Sequence length
183 AA
Molecular weight
19062,86530 Da
Isoelectric point
4,49917
Sequence
VLKSRAVKFISIPVVAMAVVVGTASVSLADTSVTVRQGQTLSIIAASHGTSWQYLRDINSLNNPNLIYPGEVIKLGGVTSTPSSPTVYQPIVNIENSSQTASSSTVNWDAIASCESSGDWSADTGNGFYGGLQFTESTWLAYGGGFYAQFPNQASQGDQETVANAVLASQGIGAWPVCGTYGN
Other Proteins in cluster: phalp2_10005
Total (incl. this protein): 3 Avg length: 173,7 Avg pI: 4,98
Protein ID Length (AA) pI
6XRhH 183 4,49917
7DWg 169 5,36841
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_2972
15HlW
 4 39,3% 150 2.366E-21
2 phalp2_35136
5BA7B
 1 34,9% 169 4.993E-17
3 phalp2_24058
7YNca
 5 33,8% 142 5.966E-16
4 phalp2_29678
16gM1
 8 33,8% 192 2.059E-15
5 phalp2_33079
4EBG4
 14 27,5% 174 4.392E-08

Domains

Domains
Disordered region
Transgly
Representative sequence (used for alignment): 6XRhH (183 AA)
Member sequence: 1jcmk (169 AA)
1 183 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF06737

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1jcmk
Method AlphaFoldv2
Resolution 72.59
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (6XRhH) rather than this protein.
PDB ID
6XRhH
Method AlphaFoldv2
Resolution 74.57
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50