Protein

Protein accession
1jVNL [EnVhog]
Representative
6UwZN
Source
EnVhog (cluster: phalp2_13777)
Protein name
1jVNL
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MDFIQATYFTPGRQGATVDQIVMHWMDGTLAATIDTFTNGSRQASAHYGIGEGDEKQFVQEGDTAWADGDWNENIRSIAIEHSAQPGRDATDDTYTRSIARVADICSRYGITPSADTILPHKNFFNTDCPGTLDLGRIIAGAQAALNGSAAAPTQPAQPAPAAAAGSYLDITPGPGQCRVDPGDTLSGIAVQFGVDLNALIALNGITEPDKIFPGMLLDLPQAPAAPAAPAGLPPYCTVDPNDTLGGIAVQYGVSLQYILDRNPGINADLIVPGQRINL
Physico‐chemical
properties
protein length:279 AA
molecular weight:29232,3 Da
isoelectric point:4,28
hydropathy:-0,13
Representative Protein Details
Accession
6UwZN
Protein name
6UwZN
Sequence length
312 AA
Molecular weight
34071,13880 Da
Isoelectric point
9,77226
Sequence
MTLKIKWVGSPNFRSQSGVKKQFIVLHWMVGSLAGTDRVFQDANRKVATNYGIEENKVHQYVKDEDYAFGSGTTHANKFGISIEHEGGWMQKDGTRKVPTRGTLDTSAELCAKIAREHNLGKLKLGVNVFPHNHFVATQCPGTLNMSYIVDKANEINAELDAPVAPVAPAPKPIVLTNPAQYHIVQPGEFLSRIAAKYKISLEELVKKNNIKNVNLVFPGQKLLIKDAVTVSKPVQKPAPAAPVSPVQPPKVEAPKPAAKPVVEAPKTYTVKPNDNLTNIARAHKTTIAVLKKLNGIKNANLIQVGQVIKLP
Other Proteins in cluster: phalp2_13777
Total (incl. this protein): 4 Avg length: 287,0 Avg pI: 5,89
Protein ID Length (AA) pI
6UwZN 312 9,77226
1cIxN 279 4,24050
4YhRG 278 5,26115
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_26331
1cKvm
 65 27,1% 210 1.929E-16
2 phalp2_22268
7qxva
 11 21,9% 237 9.277E-14
3 phalp2_33293
64Cdz
 41 22,1% 388 3.998E-13
4 phalp2_27991
13d0S
 3 18,2% 279 2.305E-07

Domains

Domains
Ami2
LysM
LysM
Representative sequence (used for alignment): 6UwZN (312 AA)
Member sequence: 1jVNL (279 AA)
1 312 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01476, PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1jVNL
Method AlphaFoldv2
Resolution 85.63
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (6UwZN) rather than this protein.
PDB ID
6UwZN
Method AlphaFoldv2
Resolution 82.87
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50