Protein

Protein accession
1jGka [EnVhog]
Representative
6iMbB
Source
EnVhog (cluster: phalp2_28989)
Protein name
1jGka
Lysin probability
99%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MIMKERTLWPLVMGVAAFVGIVFAVSRCTHRTDEVSEERERGRHFDDSVQNAEIMESVYDRIFQLRLDHPDIVMAQCILKSGEFTSDLFKEGNNCLGMKVPGQRPTFAVGVCRGHAKFKSWHDCIADYALWQSAYGRGLSDDAYLALLDRIYAENGSYAGKLKSIIRKYNL
Physico‐chemical
properties
protein length:171 AA
molecular weight:19446,1 Da
isoelectric point:6,95
hydropathy:-0,22
Representative Protein Details
Accession
6iMbB
Protein name
6iMbB
Sequence length
176 AA
Molecular weight
19998,62290 Da
Isoelectric point
6,58152
Sequence
MRLTTADRRIITYCAVILGVFLIAGLLVWVQAWRNGHRTDVECVLTGSTAAVHPEWPDVYTQVYDLIFELRLDHPDIVMAQAIEESGHFRSTLFTEGHNCLGMKVPYTRPTTAVGTLEGHARYASVRDCILDYALWQSSFARGLSRDEYLALLDRTYASKKGYSDRLRRIIQDSSL
Other Proteins in cluster: phalp2_28989
Total (incl. this protein): 11 Avg length: 178,2 Avg pI: 6,29
Protein ID Length (AA) pI
6iMbB 176 6,58152
1erFG 170 5,44634
61wzJ 171 6,20121
6GdSK 194 9,47074
6aWbg 172 5,48561
6hetJ 172 5,62777
6jPVS 183 6,29528
6jawN 171 5,85080
A0A8S5VL01 209 5,65272
A0A8S5VLZ2 171 5,65869
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_24545
7HQNr
 274 44,2% 113 1.276E-35
2 phalp2_32846
31z3H
 398 41,9% 112 2.670E-33
3 phalp2_40200
2dngU
 73 35,0% 117 1.422E-27
4 phalp2_34515
4NK1T
 22 39,0% 110 1.917E-24
5 phalp2_5845
5o5rF
 7 35,6% 115 3.206E-23
6 phalp2_22607
1LayP
 7 30,9% 126 3.761E-19
7 phalp2_2868
lM6F
 24 28,3% 113 8.985E-16
8 phalp2_38265
eDdp
 15 27,9% 161 2.280E-15
9 phalp2_19706
4IQe4
 2 28,7% 132 5.056E-14
10 phalp2_28440
1Kzbw
 6 26,9% 115 5.201E-12

Domains

Domains
GLUCO
Representative sequence (used for alignment): 6iMbB (176 AA)
Member sequence: 1jGka (171 AA)
1 176 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01832

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1jGka
Method AlphaFoldv2
Resolution 92.83
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (6iMbB) rather than this protein.
PDB ID
6iMbB
Method AlphaFoldv2
Resolution 91.46
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50