Protein

Protein accession
1gdeG [EnVhog]
Representative
QDvc
Source
EnVhog (cluster: phalp2_6531)
Protein name
1gdeG
Lysin probability
87%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
PNKDSKQWFKAMDYARIVYSGRIAYDLTEGSTHYHATYVKPSWAKTKTRTTRIESHIFYRWEK
Physico‐chemical
properties
protein length:63 AA
molecular weight:7616,5 Da
isoelectric point:9,80
hydropathy:-1,02
Representative Protein Details
Accession
QDvc
Protein name
QDvc
Sequence length
55 AA
Molecular weight
6481,03710 Da
Isoelectric point
4,52168
Sequence
YLFTSGLVDGTMILKDVTEGATHYHADYVEPDWEKTKTNTIEIEDHIFYRWETAE
Other Proteins in cluster: phalp2_6531
Total (incl. this protein): 27 Avg length: 47,5 Avg pI: 6,56
Protein ID Length (AA) pI
QDvc 55 4,52168
1BTFh 36 5,77782
1vpqo 50 5,33055
1wxxf 38 5,15634
1zZJr 37 6,44318
2RHiv 68 6,38219
2T1me 52 6,29278
2UQAd 34 6,20434
2pFZZ 34 6,28050
2vyOn 40 9,22196
2x5tW 39 6,23992
34YyP 45 6,78552
3CkCT 66 5,30202
3ISUW 45 6,43977
3J5XP 45 5,04284
3JBCr 76 9,64055
3JaMz 42 7,09717
3mMw0 40 7,02356
43qvp 68 4,93211
4wyH 36 8,03142
7D24x 55 4,54799
8BjIV 41 4,83281
8DATT 49 8,24694
8yyYT 50 9,59865
nDN0 37 6,01308
s4rZ 41 5,88542
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_26182
8DQMh
 17 62,5% 48 1.998E-19
2 phalp2_32543
1rAOO
 10 60,0% 40 1.714E-17
3 phalp2_27400
4Jgp2
 31 56,7% 37 5.839E-12
4 phalp2_16725
Se3P
 2 56,7% 37 3.959E-11
5 phalp2_39727
8BIeW
 10 50,0% 38 2.687E-10
6 phalp2_8311
8D3Ft
 1 38,8% 36 5.129E-05

Domains

Domains
Unannotated
Representative sequence (used for alignment): QDvc (55 AA)
Member sequence: 1gdeG (63 AA)
1 55 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (QDvc) rather than this protein.
PDB ID
QDvc
Method AlphaFoldv2
Resolution 89.39
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50