Protein

Protein accession
1gdEZ [EnVhog]
Representative
3gDxq
Source
EnVhog (cluster: phalp2_34756)
Protein name
1gdEZ
Lysin probability
98%
PhaLP type
VAL
Probability: 99% (predicted by ML model)
Protein sequence
VGGSQTIKIEGTRTTDINGAVFNVYNDTFDESIHGNIDLRYGIEDGTFSEHIKSDITRNYSAKVQEFLKETYEQHITESSKIFVKTDYEHHVTGNSKILVKGTYDLDSTGAMTIDGSTVKINQPSGTQNAARKGDAADTGEGAHGDGSDVIEAGSGTVLIGDSSSVVAPTESTEVTESDLTEIQLPEILNSEPKSSTVGGAGDDDPQGEDDATGATRSLLPPAGRSGGAVSAGGSGAESGAIPENAITVPGDCTRPDLGSQSERYESNGNPGAINTKSASADRGGWSYGSYQIATKVGTFKSWMSFLAKEENGYTDFYNSLNNVGGNAAATRGDTSFRNKWKELAANDTTATRFKQAQHDFIQRTHHDPAVRSITKDTGINVCDGSHSNGLQDTVWSTAVQFGPGGARKIFKEAHTSLKQKNAKKDPPVTVITDADLINEIHDIKINTVPTRFRSSPALHGGLISRFKSERGVALANASTGSTTTSSTIV
Physico‐chemical
properties
protein length:490 AA
molecular weight:51808,8 Da
isoelectric point:5,19
hydropathy:-0,58
Representative Protein Details
Accession
3gDxq
Protein name
3gDxq
Sequence length
360 AA
Molecular weight
37878,21600 Da
Isoelectric point
4,96963
Sequence
MGIAIHRHSDDRSCGATTVVSNQSTVTADGLLVSVEPDENSHGGGALSSQANGVYVEGKLVIRDGDPGAADPVPGHVSTPASSGSGTIFVGFPTARALSPTTIAFELEDQPTQTPITDQPDRAESNTPGGGAIAPRVDGGPFVNAGVEFTPGEPSLCTRTDIGTLSERYESNGDPAAIGRDRTGGYSYGTYQIATKVGTMNSFLSYMKQYTDMYSQLQSAGGNTGATNGTTAFKNTWVSLAADPQFKQAQHDFIQVTHYDKLVKKIKNDTGIDICDGTHCNGLQDAVWSISVQHGPGSRIPTLGIANAGASPTDDDIINAIFDERDNVNKYFASSTAKVKQSVANRFTYERQGALQMCGI
Other Proteins in cluster: phalp2_34756
Total (incl. this protein): 18 Avg length: 364,7 Avg pI: 5,31
Protein ID Length (AA) pI
3gDxq 360 4,96963
17wRO 360 5,56291
2kKPV 381 5,37620
31gfT 389 5,51392
4uved 388 5,64226
6CvdY 363 5,16720
6E9Sn 273 4,60904
7HmBV 360 5,01680
7Odt 317 5,78396
7P52 317 5,96022
7TQ8 379 4,90483
8DxzS 360 5,01680
8E3tm 388 5,64226
8xFSF 389 5,51392
8xGzv 317 5,41934
Rs54 373 5,23631
prjA 360 5,11206
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_14747
6MvJV
 1 34,7% 377 1.956E-67

Domains

Domains
Unannotated
T6SS_VgrG3-like_C
Representative sequence (used for alignment): 3gDxq (360 AA)
Member sequence: 1gdEZ (490 AA)
1 360 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF21277

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (3gDxq) rather than this protein.
PDB ID
3gDxq
Method AlphaFoldv2
Resolution 78.68
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50