Protein

Protein accession
1gJ6c [EnVhog]
Representative
3nOii
Source
EnVhog (cluster: phalp2_5516)
Protein name
1gJ6c
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MKTFRMAVRAFELMIFIVLFSWLLIISLKLRAEAESPVEAVQAMTVQARQVEMKATYNVPLDDELQFFIINLCEEHHIDPAVVISIIDAESDFDADAIGDSGNSLGLMQIQPRWHQERMDKLGVNNLLDPYQNVTVGVDYLAELLDSYDGNMTKALIAYNAGQLGAYKHYFSRDVYSNDYSDEVLAEIENLTEGMINMPYSNDPLADFDAWDAEQNKRLAALPVCADCDEPIQDEYAYYKNGEWICENCMDSYRRDVQPE
Physico‐chemical
properties
protein length:260 AA
molecular weight:29686,1 Da
isoelectric point:4,22
hydropathy:-0,22
Representative Protein Details
Accession
3nOii
Protein name
3nOii
Sequence length
244 AA
Molecular weight
27545,86150 Da
Isoelectric point
4,40698
Sequence
MQVEMAEAREDEEIYVVEISEPKMQAEVIVPEVKAIQVTTVSIYPVPLDTELQLFIVGLCEDHHIEPAIVFAMIDRESDFRADVVGDSGKSFGLMQIQKRFHIERMEDLGCTDLLDPYQNVTVGIDYLAECLNKDKGIEWALMAYNGGASYANKMAQKGAVSNYASEVLTNSEKLKEGVQTMFYTDNAILDAERHQAAQDRKLAQLPVCADCDHPIQDETAYYINGEWICRDCMSSYEREVLPE
Other Proteins in cluster: phalp2_5516
Total (incl. this protein): 6 Avg length: 253,7 Avg pI: 4,53
Protein ID Length (AA) pI
3nOii 244 4,40698
2lBRA 293 4,86601
3Pyb7 248 4,44790
3nGws 260 4,68356
5Kq4b 217 4,54447
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_36053
6dqTO
 7 47,3% 167 7.294E-56
2 phalp2_31447
3o77A
 181 51,8% 158 1.356E-52
3 phalp2_4037
19be8
 11 45,8% 155 1.905E-41
4 phalp2_600
139Z6
 763 41,6% 168 7.187E-39
5 phalp2_12998
3nWhM
 100 38,9% 177 4.165E-32
6 phalp2_36276
81fJ
 27 27,8% 169 2.649E-22
7 phalp2_980
2m07J
 181 27,6% 170 4.195E-21
8 phalp2_10350
1zJUf
 4 30,0% 170 1.942E-20
9 phalp2_26221
naqH
 11 31,1% 154 2.174E-17
10 phalp2_30280
4kfmc
 1 31,0% 158 2.174E-17

Domains

Domains
Disordered region
SLT
Unannotated
Representative sequence (used for alignment): 3nOii (244 AA)
Member sequence: 1gJ6c (260 AA)
1 244 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01464

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1gJ6c
Method AlphaFoldv2
Resolution 86.44
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3nOii) rather than this protein.
PDB ID
3nOii
Method AlphaFoldv2
Resolution 84.84
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50