Protein

Protein accession
1gDkd [EnVhog]
Representative
23SDQ
Source
EnVhog (cluster: phalp2_19201)
Protein name
1gDkd
Lysin probability
99%
PhaLP type
endolysin
Probability: 90% (predicted by ML model)
Protein sequence
VRDKMTHKFTTVQNGSKGTDVYVLQSFLRSMMYVGAGGKPLDVDGEAGKNTVYAINTFKKQNNIYKVNGEQWQADGVFDEKCWCRLGLGSDEPAAVSNASIRKMYDWAVKTCNDPNTGYSQEYRNERKVNGITYFDCSSFVYYALYYGGFAVDPKAWPFTTYNMQPVLLNLGFREYDAAAMIWKPADILWSQEHTEIVYQGADRAGSGYTMGAHGKTNRALADQVSINTFISTYTKYPKLYRYEG
Physico‐chemical
properties
protein length:245 AA
molecular weight:27729,8 Da
isoelectric point:8,22
hydropathy:-0,52
Representative Protein Details
Accession
23SDQ
Protein name
23SDQ
Sequence length
237 AA
Molecular weight
26942,57830 Da
Isoelectric point
6,58920
Sequence
MTHEFHTVKKGTTGIDVTVLQSFFRASMFIGKDGKPIEIDGISGENTVYAINTFKKQNAIYNVAGETWNQDGVFDSNCWERLGLGKETSGISVDKIYQFGVNTCNNPNVGYSQEYRNNRTVNGITYYDCSSFVYYALCNAGFNLDNTAWPFTTYNMQSILKNLGFTEYDSKNVTWKKSDILWSQEHTEIVHHGTTNKGEGYTMGAHGKTNRTLENQVSINNFISNYTKYPKLYRYEG
Other Proteins in cluster: phalp2_19201
Total (incl. this protein): 3 Avg length: 283,0 Avg pI: 6,60
Protein ID Length (AA) pI
23SDQ 237 6,58920
A0A2Z4GUC1 367 4,99333
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_3138
81BGN
 21 54,1% 146 1.024E-49
2 phalp2_10369
1I9en
 275 34,4% 154 1.877E-08

Domains

Domains
Unannotated
Unannotated
Representative sequence (used for alignment): 23SDQ (237 AA)
Member sequence: 1gDkd (245 AA)
1 237 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (23SDQ) rather than this protein.
PDB ID
23SDQ
Method AlphaFoldv2
Resolution 92.21
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50