Protein

Protein accession
1gCb1 [EnVhog]
Representative
3nWCb
Source
EnVhog (cluster: phalp2_18035)
Protein name
1gCb1
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MTIHKLLTKVNYDKYGSTSRIKYIVVHYVGASGGAEDNCRYFHTKYRDASAHYFVGHKGEIWQCVQDKDIAWHCGRAGKVSDKKPNNQNSIGIEMCCYKEKGTWKFYDATVESTILLVKDLMKKYNVPVENVIRHYDVTGKSCPRPYVLNNTKHTWTDFKKALTTTATANKEIYRIRKNWDDVKSQKAAFEILENAINYVKKHPEYKAFDSTGKQVYPVVEDKKTIEDIAKEVIAGKWGNGKARFNALEKAGYDSDAVQAMVNKLMK
Physico‐chemical
properties
protein length:267 AA
molecular weight:30614,6 Da
isoelectric point:9,31
hydropathy:-0,66
Representative Protein Details
Accession
3nWCb
Protein name
3nWCb
Sequence length
193 AA
Molecular weight
22368,36930 Da
Isoelectric point
8,95384
Sequence
RAGSVTDKKCNNQNSIGIEMCCYKENGVWKFYDETVEATIELTKMLMEKYDVPIENVIRHYDVTGKMCPRPYVKNNTKHTWSDFKAALVDKKEPEVKKIYRVRKSWDNAKSQIGAFEMLDNAKRLVDKKSGYSVYDWEGNKVYPVKAEEKTVEELAKEVIKGLWGNGSAREKRLTAAGYDYEKVQAEVNKMMR
Other Proteins in cluster: phalp2_18035
Total (incl. this protein): 3 Avg length: 243,3 Avg pI: 9,06
Protein ID Length (AA) pI
3nWCb 193 8,95384
1gATu 270 8,93192
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_26828
3TOBT
 44 51,0% 198 1.821E-60
2 phalp2_28966
5TN9I
 3 45,0% 162 3.776E-39
3 phalp2_32070
5P7Lm
 156 36,5% 241 4.173E-34
4 phalp2_3987
7ylun
 65 33,3% 195 5.734E-23
5 phalp2_11417
eYHn
 21 29,0% 196 3.623E-17
6 phalp2_10280
1cMFf
 75 26,3% 239 4.376E-14
7 phalp2_38193
7fGuC
 2 29,8% 144 1.255E-10

Domains

Domains
Ami2
Unannotated
CW_7
Representative sequence (used for alignment): 3nWCb (193 AA)
Member sequence: 1gCb1 (267 AA)
1 193 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510, PF08230

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1gCb1
Method AlphaFoldv2
Resolution 93.39
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3nWCb) rather than this protein.
PDB ID
3nWCb
Method AlphaFoldv2
Resolution 90.06
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50