Protein

Protein accession
1gBk8 [EnVhog]
Representative
41qyj
Source
EnVhog (cluster: phalp2_6760)
Protein name
1gBk8
Lysin probability
99%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MPTPHKFYLQVIGKAFDEDGVYGVQCVDGFKAFCRLVLGWNIGKMSICSPTGYATSIWDNFERLGFNKYFDKVAPNQMVDGDWAIWQKGSRPCPYSHVAMFRRDNGNGTGVFLGQNQNGARAFNQVNISYSGLRGAFRPKIYHQATGHKNYVNLPPQYDKWAFYNLNSAPVKKNAIGNLNPKKFGGLSYYIYSYRDNRTTAEIQTIQFGRVKIYIHNTPATITYDRYLYKNGNH
Physico‐chemical
properties
protein length:234 AA
molecular weight:26735,0 Da
isoelectric point:9,60
hydropathy:-0,54
Representative Protein Details
Accession
41qyj
Protein name
41qyj
Sequence length
225 AA
Molecular weight
25599,03950 Da
Isoelectric point
9,62160
Sequence
MTAKEFYERHIGKAVDIDGAAGVQCVDLFKAFTKENYGIWKYNCTNGYASGLWIYRKDKPYYKYFVDGNINSLQNGDWVIWGNCKIAPYSHVAMYYNGKFLGQNQNGKRYATCINITKQGVIGVLRPKMYIPSGTPTNKKTYVNLPPQYDSWAVYKLNSKPLKVNAIGKLNPKKYGGLSYYVYAYRDNGATVEIQTSVYGRVKIYVKNTPAIITVGNYKYKNGTH
Other Proteins in cluster: phalp2_6760
Total (incl. this protein): 19 Avg length: 230,2 Avg pI: 8,76
Protein ID Length (AA) pI
41qyj 225 9,62160
21iGp 234 9,44889
23Frv 234 9,46417
23RCf 240 9,49195
23vb0 234 9,48493
24Ltz 240 9,47996
3VFfl 239 9,51735
3WGG4 234 9,57808
3dURk 219 8,68339
3gOhN 231 9,15962
3giMQ 208 9,16207
4JXF6 235 9,56184
5VDm8 228 9,07800
6pNJI 224 4,89613
8beT3 234 9,53064
8tSh6 216 6,27738
K8Bt 224 5,09626
oim4 241 9,32124
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_31225
89YgB
 257 43,3% 159 7.099E-48
2 phalp2_31499
3TDyB
 20 22,0% 300 9.212E-26
3 phalp2_24703
6bxM0
 24 33,3% 162 4.342E-25
4 phalp2_5003
1e1XA
 91 27,8% 183 7.412E-20
5 phalp2_39580
6iLgH
 177 33,9% 153 1.179E-18
6 phalp2_14289
3y0s8
 2 25,5% 227 3.964E-16
7 phalp2_23555
7sVyK
 88 29,2% 154 9.903E-16
8 phalp2_11577
18WTO
 29 26,8% 175 2.472E-15
9 phalp2_8656
45aVs
 41 30,8% 149 4.545E-15
10 phalp2_26341
1gBcI
 110 30,5% 154 3.819E-14

Domains

Domains
Unannotated
Unannotated
Representative sequence (used for alignment): 41qyj (225 AA)
Member sequence: 1gBk8 (234 AA)
1 225 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (41qyj) rather than this protein.
PDB ID
41qyj
Method AlphaFoldv2
Resolution 91.49
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50